RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PNLDC1Q8NA58 520 aaKnown RBP4.31□□□□□ -1.72
VTI1B-202ENST00000553619 SPERTQ8NA61 448 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 OR1J1Q8NGS3 322 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 MCFD2Q8NI22 146 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 DYNC2LI1Q8TCX1 351 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 SLC7A6Q92536 515 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 PIGTQ969N2 578 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 SPSB4Q96A44 273 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 SLC25A46Q96AG3 418 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 HAVCR1Q96D42 359 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 FAM71F1Q96KD3 344 aaPredicted RBP4.31□□□□□ -1.72
VTI1B-202ENST00000553619 CEP19Q96LK0 163 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 CMTM3Q96MX0 182 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 DACH2Q96NX9 599 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 DERL3Q96Q80 235 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 S100A13Q99584 98 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 C1QTNF6Q9BXI9 259 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 TPK1Q9H3S4 243 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 TMEM138Q9NPI0 162 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 GPR84Q9NQS5 396 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 NKIRAS2Q9NYR9 191 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 CCDC59Q9P031 241 aaKnown RBP4.31□□□□□ -1.72
VTI1B-202ENST00000553619 ABRACLQ9P1F3 81 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 RABL2AQ9UBK7 228 aaPredicted RBP4.31□□□□□ -1.72
VTI1B-202ENST00000553619 FBXO9Q9UK97 447 aaPredicted RBP4.31□□□□□ -1.72
VTI1B-202ENST00000553619 RABL2BQ9UNT1 228 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 PIGLQ9Y2B2 252 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 STARD10Q9Y365 291 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 MPC1Q9Y5U8 109 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 PEX16Q9Y5Y5 336 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 POLEQ07864 2286 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 NCOR2Q9Y618 2525 aa4.31□□□□□ -1.72
VTI1B-202ENST00000553619 MAP1BP46821 2468 aaKnown RBP4.31□□□□□ -1.72
VTI1B-202ENST00000553619 ATRXP46100 2492 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 IGHV2OR16-5A0A0B4J2B6 119 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 IGHV1-18A0A0C4DH31 117 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 A0A1W2PPK0 400 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 A0A1W2PPW3 197 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 TUBAL3A6NHL2 446 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 SULT1B1O43704 296 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GMDSO60547 372 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GOSR1O95249 250 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CST4P01036 141 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 NRASP01111 189 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CECR9P0C854 216 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CALCBP10092 127 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CCL2P13500 99 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 IGFBP3P17936 291 aaPredicted RBP4.3□□□□□ -1.72
VTI1B-202ENST00000553619 ATF1P18846 271 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CD40P25942 277 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GLRXP35754 106 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 FUT6P51993 359 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 SCAND1P57086 179 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 FAM3AP98173 230 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF92Q03936 586 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 HGFACQ04756 655 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 MXD1Q05195 221 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 KRTAP1-1Q07627 177 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GPR176Q14439 515 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 OR8B8Q15620 311 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 SNAI3Q3KNW1 292 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GAGE13Q4V321 117 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 BEX5Q5H9J7 111 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GLYATL3Q5SZD4 288 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 IDNKQ5T6J7 187 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 LHFPL2Q6ZUX7 228 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 NCCRP1Q6ZVX7 275 aaPredicted RBP4.3□□□□□ -1.72
VTI1B-202ENST00000553619 MOB3CQ70IA8 216 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 KRT74Q7RTS7 529 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF584Q8IVC4 421 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF843Q8N446 348 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 DNAAF1Q8NEP3 725 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 OR1M1Q8NGA1 313 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 OR5A2Q8NGI9 324 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 OR51A4Q8NGJ6 313 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 OR13C5Q8NGS8 318 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 NDNFQ8TB73 568 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 SYNPRQ8TBG9 265 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 C15orf40Q8WUR7 153 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 NEU4Q8WWR8 484 aaPredicted RBP4.3□□□□□ -1.72
VTI1B-202ENST00000553619 S100ZQ8WXG8 99 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 PIGCQ92535 297 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 PHF21AQ96BD5 680 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 SPSB1Q96BD6 273 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CMBLQ96DG6 245 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 BORCS8Q96FH0 119 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 ZC3HAV1LQ96H79 300 aaKnown RBP4.3□□□□□ -1.72
VTI1B-202ENST00000553619 WFIKKN1Q96NZ8 548 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GPER1Q99527 375 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 TSC22D3Q99576 134 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 UQCC2Q9BRT2 126 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 DCUN1D5Q9BTE7 237 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 RNF167Q9H6Y7 350 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 PLGRKTQ9HBL7 147 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CYSLTR2Q9NS75 346 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 PTTG3PQ9NZH4 202 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF319Q9P2F9 582 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 GHRLQ9UBU3 117 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 STEAP1Q9UHE8 339 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms