RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SLC5A10A0PJK1 596 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 OR5H1A6NKK0 313 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 F8VP50 259 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 EIF1BO60739 113 aaKnown RBP3.16□□□□□ -1.9
SCFD1-209ENST00000553280 CTDNEP1O95476 244 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 FADS2O95864 444 aaKnown RBP3.16□□□□□ -1.9
SCFD1-209ENST00000553280 IGHV3-11P01762 117 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 EIF1P41567 113 aaKnown RBP3.16□□□□□ -1.9
SCFD1-209ENST00000553280 RANBP1P43487 201 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 DSTNP60981 165 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 TOMM34Q15785 309 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-209ENST00000553280 PRSS8Q16651 343 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 RNASE13Q5GAN3 156 aaKnown RBP3.16□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF691Q5VV52 312 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 Q5W150 140 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 Q6ZSR6 202 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 FAM19A1Q7Z5A9 133 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 NELFCDQ8IXH7 590 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 ENTHD1Q8IYW4 607 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 CYB561A3Q8NBI2 242 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 ADTRPQ96IZ2 230 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 FOPNLQ96NB1 174 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 ACBD6Q9BR61 282 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 WDR55Q9H6Y2 383 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-209ENST00000553280 SPACA1Q9HBV2 294 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 EXOSC4Q9NPD3 245 aaKnown RBP3.16□□□□□ -1.9
SCFD1-209ENST00000553280 ACOT13Q9NPJ3 140 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 RHBDL2Q9NX52 303 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 IGSF9BQ9UPX0 1349 aa3.16□□□□□ -1.9
SCFD1-209ENST00000553280 IGLV3-16A0A075B6K0 115 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 TRAV8-6A0A0B4J262 113 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 IGHV7-4-1A0A0J9YVY3 117 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 RNASEK-C17orf49H0YIS7 233 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 M0R1X1 148 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 CCDC22O60826 627 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 CD8AP01732 235 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 CD9P21926 228 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 PAX6P26367 422 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 CXCL12P48061 93 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 C16orf72Q14CZ0 275 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 ANGPT1Q15389 498 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 CDNFQ49AH0 187 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 TTC32Q5I0X7 151 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF684Q5T5D7 378 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 SYT6Q5T7P8 510 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-209ENST00000553280 RESP18Q5W5W9 173 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 NANOGP8Q6NSW7 305 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 GUSBP11Q6P575 273 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 BHLHA15Q7RTS1 189 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-209ENST00000553280 SSX6Q7RTT6 188 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 UBALD2Q8IYN6 164 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 TMEM256Q8N2U0 113 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 C17orf78Q8N4C9 275 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF645Q8N7E2 425 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 OR2Y1Q8NGV0 311 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 UBALD1Q8TB05 177 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 ENKURQ8TC29 256 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 NT5CQ8TCD5 201 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 DOK4Q8TEW6 326 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 MRPL48Q96GC5 212 aaKnown RBP3.15□□□□□ -1.91
SCFD1-209ENST00000553280 SNF8Q96H20 258 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 ALS2CR12Q96Q35 445 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 PDCD1LG2Q9BQ51 273 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 BEX2Q9BXY8 128 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 VCXQ9H320 206 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 C1orf198Q9H425 327 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 PLEKHA1Q9HB21 404 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 MAT2BQ9NZL9 334 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 RAB23Q9ULC3 237 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 PPIL1Q9Y3C6 166 aa3.15□□□□□ -1.91
SCFD1-209ENST00000553280 AHDC1Q5TGY3 1603 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-209ENST00000553280 ARHGAP21Q5T5U3 1957 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 CCL15-CCL14A0A0B4J2E2 113 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 RBFOX2O43251 390 aaKnown RBP eCLIP3.14□□□□□ -1.91
SCFD1-209ENST00000553280 MED6O75586 246 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 FOXH1O75593 365 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 VAMP5O95183 116 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 IGLV2-8P01709 118 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 CISD3P0C7P0 127 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 NQO2P16083 231 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 OPRK1P41145 380 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 OR12D2P58182 307 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 TSPAN5P62079 268 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 IL5RAQ01344 420 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 GUSBP1Q15486 140 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 CCL15Q16663 113 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 SLC25A35Q3KQZ1 300 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 YIF1BQ5BJH7 314 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 ZCCHC24Q8N2G6 241 aaKnown RBP3.14□□□□□ -1.91
SCFD1-209ENST00000553280 ATPAF2Q8N5M1 289 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 TTLQ8NG68 377 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 OR1L1Q8NH94 360 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 CIRBP-AS1Q8TBR5 109 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 SFXN5Q8TD22 340 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 TMEM159Q96B96 161 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 NEURL3Q96EH8 262 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF75AQ96N20 296 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 VAT1Q99536 393 aa3.14□□□□□ -1.91
SCFD1-209ENST00000553280 ZNF430Q9H8G1 570 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-209ENST00000553280 OR2S2Q9NQN1 319 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms