RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LGALS8O00214 317 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 SLC1A7O00341 560 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 P2RY10O00398 339 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 RGS10O43665 173 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 CLIC3O95833 236 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 ECDO95905 644 aaPredicted RBP8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 IGHV2-70P01814 119 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 MT-ND2P03891 347 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 GRPP07492 148 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 GNAO1P09471 354 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 LIMS3P0CW19 117 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 LIMS4P0CW20 117 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 PSMA1P25786 263 aaKnown RBP8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 RBP2P50120 134 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 BMXP51813 675 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 ATP1B3P54709 279 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 DVL1P1P54792 670 aaPredicted RBP8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 WNT4P56705 351 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 MFGE8Q08431 387 aaPredicted RBP8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 MAB21L1Q13394 359 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 TRAM1Q15629 374 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 SMIM21Q3B7S5 101 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 YIF1BQ5BJH7 314 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 WDR38Q5JTN6 314 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 LHFPL2Q6ZUX7 228 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 MOB3CQ70IA8 216 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 AHSA2Q719I0 299 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 SSX6Q7RTT6 188 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 MKXQ8IYA7 352 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 OR1M1Q8NGA1 313 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 OR8B3Q8NGG8 313 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 OR13C3Q8NGS6 347 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 OR14K1Q8NGZ2 314 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 NRG4Q8WWG1 115 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 SMIM19Q96E16 107 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 BORCS8Q96FH0 119 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 MED30Q96HR3 178 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 LYZL4Q96KX0 146 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 OR8B2Q96RD0 313 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 SOX7Q9BT81 388 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 TTTY10Q9BZA0 68 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 PKIBQ9C010 78 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF665Q9H7R5 613 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 C1orf123Q9NWV4 160 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 FRRS1LQ9P0K9 344 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF319Q9P2F9 582 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 DNAJB11Q9UBS4 358 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 GLS2Q9UI32 602 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 DHDHQ9UQ10 334 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 MYRFQ9Y2G1 1151 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF281Q9Y2X9 895 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 ABCA1O95477 2261 aa8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
TRAFD1-208ENST00000552890 IGHV4-61A0A0C4DH41 118 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 A0A0G2JMP0 313 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 A0A0X1KG70 313 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 A0A1B0GTI1 187 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 OOEPA6NGQ2 149 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 OR4C45A6NMZ5 311 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF732B4DXR9 585 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 PTGES3LE9PB15 166 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 H3BUI4 141 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 DENRO43583 198 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 TGFAP01135 160 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 CDK1P06493 297 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 LIPFP07098 398 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 FAHP16930 419 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 EEF1B2P24534 225 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 ACKR3P25106 362 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 PPP3R1P63098 170 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 MVKQ03426 396 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 ACSM1Q08AH1 577 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 CDK5R1Q15078 307 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 SMN1Q16637 294 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 PRSS48Q7RTY5 328 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 OR4M2Q8NGB6 313 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 CLDND2Q8NHS1 167 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 TBC1D15Q8TC07 691 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 TSEN15Q8WW01 171 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 PHYHIPQ92561 330 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 NEIL1Q96FI4 390 aaPredicted RBP8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 PATZ1Q9HBE1 687 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 ISYNA1Q9NPH2 558 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 UFSP2Q9NUQ7 469 aa8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 PAK1IP1Q9NWT1 392 aaPredicted RBP8.65□□□□□ -1.02
TRAFD1-208ENST00000552890 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.65□□□□□ -1.031e-6■■■■□ 24.3
TRAFD1-208ENST00000552890 DYSFO75923 2080 aa8.65□□□□□ -1.03
TRAFD1-208ENST00000552890 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 A0A096LNT2 108 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 NKX6-3A6NJ46 265 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 PRR32B1ATL7 298 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 LYNX1G3V0Z9 82 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 H0YL77 283 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 J3QT63 122 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 OGG1O15527 345 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 LMX1BO60663 402 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 NOS1APO75052 506 aaPredicted RBP8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 LHBP01229 141 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms