RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TMEM246Q9BRR3 403 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 MRPS18AQ9NVS2 196 aaKnown RBP15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 ERVK13-1Q9NX77 482 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 LRCH1Q9Y2L9 728 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 V9GYS6 101 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 OOEPA6NGQ2 149 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 ZNF732B4DXR9 585 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 F5H0A9 414 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 CDIPTO14735 213 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 MYL12AP19105 171 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 DCKP27707 260 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 SRP14P37108 136 aaKnown RBP15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 MRPL28Q13084 256 aaKnown RBP15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 MED21Q13503 144 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 TMEM244Q5VVB8 128 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 SFRP4Q6FHJ7 346 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 WDR82Q6UXN9 313 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 OR5A2Q8NGI9 324 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 RPL3LQ92901 407 aaKnown RBP15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 PELI1Q96FA3 418 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 TLNRD1Q9H1K6 362 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 METTL17Q9H7H0 456 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 GPR173Q9NS66 373 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 OR5V1Q9UGF6 321 aa15.48■□□□□ 0.07
PRPF40B-216ENST00000552301 SRD5A1P18405 259 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 KIR3DL2P43630 455 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 GBX2P52951 348 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 GNB2P62879 340 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 DCAF12L2Q5VW00 463 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 FAHD2BQ6P2I3 314 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 FDX2Q6P4F2 183 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 IL17RELQ6ZVW7 336 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 KRT74Q7RTS7 529 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 EGFL6Q8IUX8 553 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 GCSAMQ8N6F7 178 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 ZNF676Q8N7Q3 588 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 HAVCR2Q8TDQ0 301 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 FAHD2AQ96GK7 314 aa15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 SSBP3Q9BWW4 388 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 FGF20Q9NP95 211 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 CHCHD3Q9NX63 227 aaKnown RBP15.47■□□□□ 0.07
PRPF40B-216ENST00000552301 JMJD1CQ15652 2540 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 ANKRD61A6NGH8 418 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 A6NIN4 97 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 NDUFA2O43678 99 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 GATBO75879 557 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 SERPINA3P01011 423 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 GNAO1P09471 354 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 WNT2P09544 360 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 FAM157CP0CG43 387 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 EGR1P18146 543 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 GATA3P23771 443 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 PITPNBP48739 271 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 CCR9P51686 369 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 SEC61A1P61619 476 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 ALKBH1Q13686 389 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 MICBQ29980 383 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 DMRTC1Q5HYR2 192 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 TMPRSS11AQ6ZMR5 421 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 C11orf53Q8IXP5 236 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 TEX29Q8N6K0 151 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 SCCPDHQ8NBX0 429 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 OR10Z1Q8NGY1 313 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 JAM3Q9BX67 310 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 FGF23Q9GZV9 251 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 FRRS1LQ9P0K9 344 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 DNAJB11Q9UBS4 358 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 SLC7A11Q9UPY5 501 aa15.46■□□□□ 0.07
PRPF40B-216ENST00000552301 A8MXK9 166 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 PHF1O43189 567 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 ADAM20O43506 726 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 IFNA2P01563 188 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 CCDC159P0C7I6 412 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 MUC1P15941 1255 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 ZNF20P17024 532 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 AQP4P55087 323 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 NANOS3P60323 173 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 GMFBP60983 142 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 HOXA4Q00056 320 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 FAM76BQ5HYJ3 339 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 TMEM42Q69YG0 159 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 HAGHLQ6PII5 290 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 Q6ZSR3 168 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 RDH10Q8IZV5 341 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 ZNF671Q8TAW3 534 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 NRG4Q8WWG1 115 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 TFAP2CQ92754 450 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 C10orf35Q96D05 121 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 COMMD4Q9H0A8 199 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 OR51I2Q9H344 312 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 ISG20L2Q9H9L3 353 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 CLN8Q9UBY8 286 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 HHLA2Q9UM44 414 aa15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 EXOSC1Q9Y3B2 195 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 NIPBLQ6KC79 2804 aaeCLIP15.45■□□□□ 0.06
PRPF40B-216ENST00000552301 IGHV3OR15-7A0A075B7D8 119 aa15.44■□□□□ 0.06
PRPF40B-216ENST00000552301 EFCAB10A6NFE3 127 aa15.44■□□□□ 0.06
PRPF40B-216ENST00000552301 SRRM5B3KS81 715 aa15.44■□□□□ 0.06
PRPF40B-216ENST00000552301 H0YJX3 145 aa15.44■□□□□ 0.06
PRPF40B-216ENST00000552301 J3QLI3 93 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms