RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 ZNF75AQ96N20 296 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 FOXN4Q96NZ1 517 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 SIGLEC11Q96RL6 698 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 CNN2Q99439 309 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 METTL17Q9H7H0 456 aaPredicted RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 FGF20Q9NP95 211 aaPredicted RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 CCNB1IP1Q9NPC3 277 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 CNOT2Q9NZN8 540 aaKnown RBP5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 ATPIF1Q9UII2 106 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 FBXL3Q9UKT7 428 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 TIMM10BQ9Y5J6 103 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 TMEM14AQ9Y6G1 99 aa5.47□□□□□ -1.53
DEPDC4-210ENST00000551642 IGHV4-61A0A0C4DH41 118 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 EFCAB10A6NFE3 127 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 SLC1A7O00341 560 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PHYHO14832 338 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 SYNGR3O43761 229 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 FADS2O95864 444 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PTHP01270 115 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 HLA-HP01893 362 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 SERPINA5P05154 406 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 MRPL3P09001 348 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 SPARCP09486 303 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PATE4P0C8F1 98 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 COX5BP10606 129 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PSKH1P11801 424 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 CD79AP11912 226 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF14P17017 642 aaPredicted RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 BTF3P20290 206 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ALOX5APP20292 161 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 CRHBPP24387 322 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 DCKP27707 260 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 THBS4P35443 961 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ATP6V1E1P36543 226 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 NAA10P41227 235 aaPredicted RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ACTC1P68032 377 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ACTA1P68133 377 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 SLC35A2P78381 396 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PSG4Q00888 419 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ECH1Q13011 328 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 RAB35Q15286 201 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 CCDC92Q53HC0 331 aaPredicted RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PABPC1L2AQ5JQF8 200 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 DEGS2Q6QHC5 323 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 CFAP77Q6ZQR2 320 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 DPY19L4Q7Z388 723 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 DCXRQ7Z4W1 244 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 MDP1Q86V88 176 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ZDHHC22Q8N966 263 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 OR6N2Q8NGY6 317 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 OR2AJ1Q8NGZ0 328 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ASB17Q8WXJ9 295 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 TAF15Q92804 592 aaKnown RBP eCLIP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 GGHQ92820 318 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 LGALS12Q96DT0 336 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 MYCBPQ99417 103 aaPredicted RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 ABHD6Q9BV23 337 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 YTHDF1Q9BYJ9 559 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 OR2H1Q9GZK4 316 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 HDHD2Q9H0R4 259 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 C1orf198Q9H425 327 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 DUSP21Q9H596 190 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 RNF121Q9H920 327 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 NOX3Q9HBY0 568 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 AMBNQ9NP70 447 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 NGBQ9NPG2 151 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PNRC2Q9NPJ4 139 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 INPP5EQ9NRR6 644 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 DDX28Q9NUL7 540 aaKnown RBP5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 FKBP14Q9NWM8 211 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 SCN3BQ9NY72 215 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 UBAP1Q9NZ09 502 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 STEAP1Q9UHE8 339 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PSORS1C1Q9UIG5 152 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 BLOC1S6Q9UL45 172 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 LRCH1Q9Y2L9 728 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 POLR1DQ9Y2S0 133 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 PCDHGB5Q9Y5G0 923 aa5.46□□□□□ -1.54
DEPDC4-210ENST00000551642 IGHV1-18A0A0C4DH31 117 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 IQCMA0A1B0GVH7 501 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 A0A1W2PQL4 384 aaPredicted RBP5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 A0A1W2PR80 420 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 OR6C6A6NF89 314 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF878C9JN71 531 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 RER1O15258 196 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 SGCEO43556 437 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 XPNPEP2O43895 674 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 DOK2O60496 412 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF254O75437 659 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 RAB36O95755 333 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 LYNP07948 512 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 PTAFRP25105 342 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 DCTDP32321 178 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 OPRL1P41146 370 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 RPS27P42677 84 aaKnown RBP5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 CAPZA2P47755 286 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 HCCSP53701 268 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 DSCR9P59020 149 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 GABARAPL2P60520 117 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms