RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 CEBPDP49716 269 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 GSK3BP49841 420 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SERPINB8P50452 374 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF75DP51815 510 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 PRKAA2P54646 552 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 BIDP55957 195 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 DLX1P56177 255 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 DLX6P56179 175 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 COPZ1P61923 177 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TNFRSF9Q07011 255 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 BLMHQ13867 455 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ENDOGQ14249 297 aaKnown RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 RBMY1FQ15415 496 aaKnown RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TAF11Q15544 211 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 PCK2Q16822 640 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 MICBQ29980 383 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 LIN52Q52LA3 116 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 RFTN2Q52LD8 501 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 UNC50Q53HI1 259 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 RUNDC3AQ59EK9 446 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 WDR38Q5JTN6 314 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ARMC4Q5T2S8 1044 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ATAD3BQ5T9A4 648 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 MINOS1Q5TGZ0 78 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 CARD17Q5XLA6 110 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 STUMQ69YW2 141 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF836Q6ZNA1 936 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SLC35D2Q76EJ3 337 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OLIG3Q7RTU3 272 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SLC36A1Q7Z2H8 476 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 HDDC2Q7Z4H3 204 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 C6orf120Q7Z4R8 191 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SERPINA11Q86U17 422 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM219Q86XT9 240 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 CALHM1Q8IU99 346 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 FGFRL1Q8N441 504 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 DRAM1Q8N682 238 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ATG16L2Q8NAA4 619 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 KLHL30-AS1Q8NEE0 82 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 VPS37AQ8NEZ2 397 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OR8J2Q8NGG1 315 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OR2T11Q8NH01 316 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OR5J2Q8NH18 312 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM163Q8TC26 289 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 FNDC8Q8TC99 324 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ACTRT1Q8TDG2 376 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 CHPT1Q8WUD6 406 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 DNAJA4Q8WW22 397 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 LIPHQ8WWY8 451 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 MCHR2Q969V1 340 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ST6GALNAC6Q969X2 333 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM18Q96B42 140 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 SLC25A36Q96CQ1 311 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 RNFT2Q96EX2 444 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 CHMP6Q96FZ7 201 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 DUS3LQ96G46 650 aaKnown RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 NOL4LQ96MY1 436 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF582Q96NG8 517 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 RBM14Q96PK6 669 aaKnown RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 KCNA7Q96RP8 456 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ATF6BQ99941 703 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF649Q9BS31 505 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF426Q9BUY5 554 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 FUT8Q9BYC5 575 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TLNRD1Q9H1K6 362 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 OR51I1Q9H343 314 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 MMADHCQ9H3L0 296 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 CCNB1IP1Q9NPC3 277 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 ISYNA1Q9NPH2 558 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 CHCHD3Q9NX63 227 aaKnown RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TAS2R5Q9NYW4 299 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 STX18Q9P2W9 335 aaKnown RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 NLKQ9UBE8 527 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 IL36RNQ9UBH0 155 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 HHLA2Q9UM44 414 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 GUCA1BQ9UMX6 200 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 KLK5Q9Y337 293 aaPredicted RBP1.72□□□□□ -2.13
PTCH1-223ENST00000551623 STARD10Q9Y365 291 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 NDUFAF1Q9Y375 327 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 TIMM22Q9Y584 194 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 MINOS1-NBL1R4GNA1 71 aa1.72□□□□□ -2.13
PTCH1-223ENST00000551623 IGLV5-37A0A075B6J1 123 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 SAA2-SAA4A0A096LPE2 208 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 A0A0B4J2E0 115 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 RNF103-CHMP3A0A140T963 221 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1B0GX12 115 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1W2PRD5 423 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1W2PRF3 423 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1W2PRM7 423 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 SAC3D1A6NKF1 404 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 C17orf98A8MV24 154 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 TMEM114B3SHH9 223 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 I3L521 148 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 PGRMC1O00264 195 aaKnown RBP1.71□□□□□ -2.14
PTCH1-223ENST00000551623 SIGLEC5O15389 551 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 FGF16O43320 207 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 NDUFB3O43676 98 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 DOK2O60496 412 aa1.71□□□□□ -2.14
PTCH1-223ENST00000551623 TIPRLO75663 272 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms