RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HMGN2P46Q86SG4 172 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MDP1Q86V88 176 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 LRRC28Q86X40 367 aaPredicted RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 C10orf107Q8IVU9 208 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SKA3Q8IX90 412 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CTAGE3PQ8IX95 158 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF101Q8IZC7 436 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 C11orf42Q8N5U0 333 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF283Q8N7M2 679 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SIGLECL1Q8N7X8 197 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 LRRC75AQ8NAA5 344 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF540Q8NDQ6 660 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 WFDC9Q8NEX5 89 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 OR4F15Q8NGB8 312 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 OR4D11Q8NGI4 311 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 OR6M1Q8NGM8 313 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 OR2T6Q8NHC8 308 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MFSD8Q8NHS3 518 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CLHC1Q8NHS4 586 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 LINC01006Q8NI28 216 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF519Q8TB69 540 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 PIGXQ8TBF5 258 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 PIFOQ8TCI5 191 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GPR148Q8TDV2 347 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CDKL2Q92772 493 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 RDH5Q92781 318 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TNFRSF14Q92956 283 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM54Q969K7 222 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 NABP1Q96AH0 204 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TESCQ96BS2 214 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 UPRTQ96BW1 309 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MUCL1Q96DR8 90 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 DNAJA3Q96EY1 480 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 AURKBQ96GD4 344 aaPredicted RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 POM121L2Q96KW2 1035 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CXorf58Q96LI9 332 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 CCDC115Q96NT0 180 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TRNT1Q96Q11 434 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 S1PR3Q99500 378 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SPAG8Q99932 426 aaPredicted RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 RBM4BQ9BQ04 359 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ANP32EQ9BTT0 268 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 RBM4Q9BWF3 364 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 FUNDC2Q9BWH2 189 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 NGBQ9NPG2 151 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 POLE3Q9NRF9 147 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 DDX28Q9NUL7 540 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TAS2R5Q9NYW4 299 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 ERVK-18Q9QC07 812 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 KLK11Q9UBX7 282 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MRTO4Q9UKD2 239 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 GAB2Q9UQC2 676 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 SLC9A8Q9Y2E8 581 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 NOSIPQ9Y314 301 aaKnown RBP1.89□□□□□ -2.11
CPSF6-207ENST00000551516 TMED5Q9Y3A6 229 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 PYGO1Q9Y3Y4 419 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 WIPI2Q9Y4P8 454 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 INSIG2Q9Y5U4 225 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 FRAS1Q86XX4 4008 aa1.89□□□□□ -2.11
CPSF6-207ENST00000551516 MDFIC2A0A1B0GVS7 189 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 GNG14A0A1W2PPG7 69 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 GJE1A6NN92 205 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 KRTAP29-1A8MX34 341 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF99A8MXY4 864 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 H3BQF6 201 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 PLPP3O14495 311 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 AZIN1O14977 448 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SIGLEC5O15389 551 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 TXNL1O43396 289 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 EIF1BO60739 113 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 STX11O75558 287 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 LYPLA1O75608 230 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 AK1P00568 194 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 CSTAP01040 98 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 IGKV3-20P01619 116 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 IGHV1-46P01743 117 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ADRA2AP08913 450 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 UBTFL6P0CB48 400 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ZCCHC18P0CG32 403 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 OR12D1P0DN82 309 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 PNMTP11086 282 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 TCN1P20061 433 aaPredicted RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 CCNA2P20248 432 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 NPR2P20594 1047 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ALDH3A1P30838 453 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ARR3P36575 388 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 MPV17P39210 176 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ANP32AP39687 249 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 RFX3P48380 749 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 IDH2P48735 452 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 PITPNBP48739 271 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 FHITP49789 147 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SERPINB9P50453 376 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 ERFP50548 548 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 PSMD4P55036 377 aaKnown RBP1.88□□□□□ -2.11
CPSF6-207ENST00000551516 AQP5P55064 265 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 GMFBP60983 142 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 SLC35A1P78382 337 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 HOXC5Q00444 222 aa1.88□□□□□ -2.11
CPSF6-207ENST00000551516 MYBPC1Q00872 1141 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms