RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CDIPTO14735 213 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 SYT7O43581 403 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 WBP4O75554 376 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 EGR1P18146 543 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 PITPNBP48739 271 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 ELF3P78545 371 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 CEACAM21Q3KPI0 293 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 PLCXD3Q63HM9 321 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 FDX2Q6P4F2 183 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 KCTD8Q6ZWB6 473 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 SYS1Q8N2H4 156 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 DHRSXQ8N5I4 330 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 BOLLQ8N9W6 283 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 DEFB108BQ8NET1 73 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 OR5A2Q8NGI9 324 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 CYGBQ8WWM9 190 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 ADI1Q9BV57 179 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 VCXQ9H320 206 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 AMBNQ9NP70 447 aa12.88□□□□□ -0.35
PRPF40B-211ENST00000551063 FBN1P35555 2871 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 H0YAE9 185 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 MUC1P15941 1255 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF12P17014 697 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 NPY4RP50391 375 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 GPM6AP51674 278 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 OR12D2P58182 307 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 GNB2P62879 340 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 ADARB1P78563 741 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 HOXA4Q00056 320 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 MRPL28Q13084 256 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 GALEQ14376 348 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 KLHL22Q53GT1 634 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 CEP78Q5JTW2 689 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 SFRP4Q6FHJ7 346 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 MOB3CQ70IA8 216 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 PRSS35Q8N3Z0 413 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 C19orf18Q8NEA5 215 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 OR2G2Q8NGZ5 317 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 C12orf43Q96C57 262 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 C10orf35Q96D05 121 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 ALG8Q9BVK2 526 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 JAM3Q9BX67 310 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 METTL17Q9H7H0 456 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 PLEKHA1Q9HB21 404 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 MYRFQ9Y2G1 1151 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 HSPE1-MOB4S4R3N1 261 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 FBN3Q75N90 2809 aa12.87□□□□□ -0.35
PRPF40B-211ENST00000551063 LOC107986453A0A1B0GWG9 222 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 IRGMA1A4Y4 181 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF732B4DXR9 585 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 TNFRSF13BO14836 293 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 PHF1O43189 567 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 CLIC3O95833 236 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 NRASP01111 189 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 HTR1AP08908 422 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 KIR3DL2P43630 455 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 CCR9P51686 369 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 MICBQ29980 383 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 ODF4Q2M2E3 257 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 TMEM244Q5VVB8 128 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 WDR25Q64LD2 544 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 PHC2Q8IXK0 858 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 SCCPDHQ8NBX0 429 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 OR52I1Q8NGK6 324 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 HAVCR2Q8TDQ0 301 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 RPL3LQ92901 407 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 C4orf36Q96KX1 117 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 TECTBQ96PL2 329 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF649Q9BS31 505 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 OR51I2Q9H344 312 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 ERVK13-1Q9NX77 482 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 KAAG1Q9UBP8 84 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 INSIG2Q9Y5U4 225 aa12.86□□□□□ -0.35
PRPF40B-211ENST00000551063 ANKRD61A6NGH8 418 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 TRAPPC2LH3BP13 241 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 J3QLW9 94 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 ADAM20O43506 726 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 GATBO75879 557 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 ISG15P05161 165 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF19P17023 458 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 DCKP27707 260 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 CAPGP40121 348 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 SLC34A1Q06495 639 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 ZNF841Q6ZN19 808 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 C1QL2Q7Z5L3 287 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 PELI1Q96FA3 418 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 C7orf69Q9H7B7 122 aa12.85□□□□□ -0.35
PRPF40B-211ENST00000551063 FGF20Q9NP95 211 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms