RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 POLR3KQ9Y2Y1 108 aaPredicted RBP13.14□□□□□ -0.31
DDX54-205ENST00000548786 PPIAL4CA0A0B4J2A2 164 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 A0A1B0GTI1 187 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 LOC100130705A0A1B0GUX0 176 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 DAPL1A0PJW8 107 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 TMEM210A6NLX4 147 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 C22orf46C9J442 243 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.13□□□□□ -0.31
DDX54-205ENST00000548786 TMPRSS2O15393 492 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 MTRF1O75570 445 aaKnown RBP13.13□□□□□ -0.31
DDX54-205ENST00000548786 RHBDL1O75783 438 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 FSTL3O95633 263 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 ZNF91Q05481 1191 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 OCLNQ16625 522 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 MICBQ29980 383 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 CEACAM21Q3KPI0 293 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 WDR38Q5JTN6 314 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 ZNF684Q5T5D7 378 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 MEDAGQ5VYS4 303 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 BTNL3Q6UXE8 466 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 CATSPERDQ86XM0 798 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 BATF2Q8N1L9 274 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 PRSS35Q8N3Z0 413 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 FAM216BQ8N7L0 139 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 TMEM158Q8WZ71 300 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 LGALS12Q96DT0 336 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 NUDT16L1Q9BRJ7 211 aaKnown RBP13.13□□□□□ -0.31
DDX54-205ENST00000548786 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 RNPEPL1Q9HAU8 725 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 ABCB9Q9NP78 766 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 ERVK-18Q9QC07 812 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 DNAJB11Q9UBS4 358 aa13.13□□□□□ -0.31
DDX54-205ENST00000548786 STAB1Q9NY15 2570 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 A0A1B0GVI7 797 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 NRASP01111 189 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 ATP6V1B1P15313 513 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 GABRB1P18505 474 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 OR12D2P58182 307 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 GNG3P63215 75 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 PAX2Q02962 417 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 IKZF1Q13422 519 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 SLC25A30Q5SVS4 291 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 HAGHLQ6PII5 290 aaPredicted RBP13.12□□□□□ -0.31
DDX54-205ENST00000548786 RDH10Q8IZV5 341 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 TEX29Q8N6K0 151 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 OR14K1Q8NGZ2 314 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 CYGBQ8WWM9 190 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 ST8SIA4Q92187 359 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 PLEKHA1Q9HB21 404 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 TRIM36Q9NQ86 728 aa13.12□□□□□ -0.31
DDX54-205ENST00000548786 SMPD3Q9NY59 655 aaPredicted RBP13.12□□□□□ -0.31
DDX54-205ENST00000548786 SRRM5B3KS81 715 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 J3QLW9 94 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 DVL1O14640 695 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 SYT7O43581 403 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 FCN3O75636 299 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 SULT1C4O75897 302 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 VENTXO95231 258 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 CLIC3O95833 236 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 DBTP11182 482 aaKnown RBP13.11□□□□□ -0.31
DDX54-205ENST00000548786 SELLP14151 372 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 ZNF19P17023 458 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 PEX2P28328 305 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 KIR3DL2P43630 455 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 ACTC1P68032 377 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 ACTA1P68133 377 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 SCGB2A2Q13296 93 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 CLVS2Q5SYC1 327 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 DOK3Q7L591 496 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 LHFPL3Q86UP9 236 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 ZNF555Q8NEP9 628 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 RHOXF1Q8NHV9 184 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 TRMT10AQ8TBZ6 339 aaKnown RBP13.11□□□□□ -0.31
DDX54-205ENST00000548786 ZNF488Q96MN9 340 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 C19orf24Q9BVV8 132 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 MYRFQ9Y2G1 1151 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 V9GYS6 101 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 DOCK11Q5JSL3 2073 aa13.11□□□□□ -0.31
DDX54-205ENST00000548786 LOC107986453A0A1B0GWG9 222 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 SNTNA6NMZ2 147 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 J3QRE1 110 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 DLGAP1O14490 977 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 TNFRSF13BO14836 293 aaPredicted RBP13.1□□□□□ -0.31
DDX54-205ENST00000548786 SLC16A6O15403 523 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 FSHBP01225 129 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 IGHV4-38-2P0DP08 117 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 MUC1P15941 1255 aaPredicted RBP13.1□□□□□ -0.31
DDX54-205ENST00000548786 FGF12P61328 243 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 PAX8Q06710 450 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 SMN1Q16637 294 aaKnown RBP13.1□□□□□ -0.31
DDX54-205ENST00000548786 KLF17Q5JT82 389 aaPredicted RBP13.1□□□□□ -0.31
DDX54-205ENST00000548786 ACBD7Q8N6N7 88 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 OR5A2Q8NGI9 324 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
DDX54-205ENST00000548786 APH1BQ8WW43 257 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms