RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ZNF788Q6ZQV5 615 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 KRT74Q7RTS7 529 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 ZDHHC23Q8IYP9 409 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 CMTM4Q8IZR5 234 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 ANGPTL6Q8NI99 470 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 PIGCQ92535 297 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 FAM206AQ9NX38 181 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 ZNF816-ZNF321PA0A0X1KG74 233 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 PRR32B1ATL7 298 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 SIGLEC5O15389 551 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 FBP1P09467 338 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 PRKACGP22612 351 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 RPS7P62081 194 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 KLRD1Q13241 179 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 OCLNQ16625 522 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 TMEM236Q5W0B7 351 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 KCTD8Q6ZWB6 473 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 TRPM8Q7Z2W7 1104 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 KRT77Q7Z794 578 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 LINC01006Q8NI28 216 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 H1FXQ92522 213 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 TNFRSF14Q92956 283 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 RNF170Q96K19 258 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 ZNF556Q9HAH1 456 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 NLKQ9UBE8 527 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 SLC25A10Q9UBX3 287 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 LAMP5Q9UJQ1 280 aa14.27□□□□□ -0.13
CHMP1A-205ENST00000548650 A0A0U1RQV5 110 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 CCDC182A6NF36 153 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 RHBDL1O75783 438 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 ANXA8P13928 327 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 HOXB6P17509 224 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 GPM6AP51674 278 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 PROK1P58294 105 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 GUCA2AQ02747 115 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 APOFQ13790 326 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 FAM81AQ8TBF8 368 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 LRTOMTQ8WZ04 291 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 DPAGT1Q9H3H5 408 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 ZNF222Q9UK12 451 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 VPREB3Q9UKI3 123 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 FAM96BQ9Y3D0 163 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 RNF114Q9Y508 228 aa14.26□□□□□ -0.13
CHMP1A-205ENST00000548650 IGKV1D-17A0A075B6S4 117 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 OR2AT4A6NND4 320 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 NPFFO15130 113 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 FKBP6O75344 327 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 CLPXO76031 633 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 IGLV3-1P01715 115 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 SAA4P35542 130 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 HCCSP53701 268 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 CAV3P56539 151 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 CBX1P83916 185 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 DEFA6Q01524 100 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 FLOT2Q14254 428 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 CEP78Q5JTW2 689 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 GDPGP1Q6ZNW5 385 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 Q6ZSV7 163 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 PNKDQ8N490 385 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 NPRL2Q8WTW4 380 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 MED30Q96HR3 178 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 YIPF3Q9GZM5 350 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 OR51I2Q9H344 312 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 ELL3Q9HB65 397 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 DNAJB9Q9UBS3 223 aa14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 CAB39Q9Y376 341 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-205ENST00000548650 A0A1W2PRD5 423 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 A0A1W2PRF3 423 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 A0A1W2PRM7 423 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 TCRBV3S1A0A5B6 114 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 M0R1W7 72 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 PSMD9O00233 223 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 MRPL3P09001 348 aaKnown RBP14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 ACAA1P09110 424 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 GLRA1P23415 457 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 EEF1B2P24534 225 aaKnown RBP14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 MAP2K3P46734 347 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 GNG3P63215 75 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 ROM1Q03395 351 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 MFGE8Q08431 387 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 PDLIM3Q53GG5 364 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 DEGS2Q6QHC5 323 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 SPATA24Q86W54 205 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 ZSCAN4Q8NAM6 433 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 PAPD5Q8NDF8 572 aaKnown RBP14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 OR8B4Q96RC9 309 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 TTTY10Q9BZA0 68 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 COPS3Q9UNS2 423 aa14.24□□□□□ -0.13
CHMP1A-205ENST00000548650 TGP01266 2768 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 TMEM269A0A1B0GVZ9 245 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 A0A1W2PQ09 198 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 ACOD1A6NK06 481 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 ZNF732B4DXR9 585 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 M0QZ24 198 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 PSG2P11465 335 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 FAHP16930 419 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 NDUFB7P17568 137 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 SNAPC1Q16533 368 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 CEACAM21Q3KPI0 293 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 MIDNQ504T8 468 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms