RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 HMGA2P52926 109 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 NSUN5P1Q3KNT7 163 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 RASSF6Q6ZTQ3 369 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 KCTD8Q6ZWB6 473 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 FAM185AQ8N0U4 392 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 RNF148Q8N7C7 305 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 PGAM5Q96HS1 289 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 RNF170Q96K19 258 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 HEXA-AS1Q9H8Q6 139 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.26■□□□□ 0.19
GATC-202ENST00000548171 DNAJC27Q9NZQ0 273 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 LRP12Q9Y561 859 aa16.26■□□□□ 0.19
GATC-202ENST00000548171 IGKV1D-17A0A075B6S4 117 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 IFNGP01579 166 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 DCTDP32321 178 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 OPRL1P41146 370 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 GABRA2P47869 451 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 TIGD4Q8IY51 512 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 Q8N2B8 174 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 ZNRF1Q8ND25 227 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 TMEM185AQ8NFB2 350 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 OR8D4Q8NGM9 314 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 OR5K1Q8NHB7 308 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 PHF21AQ96BD5 680 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 R3HDM4Q96D70 268 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 HIST1H2AAQ96QV6 131 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 INTS14Q96SY0 518 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 BTBD10Q9BSF8 475 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 CDCA4Q9BXL8 241 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 MMP28Q9H239 520 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 CCDC134Q9H6E4 229 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 ELL3Q9HB65 397 aaPredicted RBP16.25■□□□□ 0.19
GATC-202ENST00000548171 BRD7Q9NPI1 651 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 SERTAD4Q9NUC0 356 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 ZNF222Q9UK12 451 aa16.25■□□□□ 0.19
GATC-202ENST00000548171 hCG_1809904A0A1W2PP81 198 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 A0A1W2PPE2 198 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 A0A1W2PR64 198 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 A0A1W2PRV1 198 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 HSD17B1P14061 328 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 ACKR3P25106 362 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 LGALS4P56470 323 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 SAMD4BQ5PRF9 694 aaKnown RBP16.24■□□□□ 0.19
GATC-202ENST00000548171 VAX1Q5SQQ9 334 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 LINC01590Q5TEZ4 76 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 SHFQ7M4L6 423 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 ZDHHC23Q8IYP9 409 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 LYG1Q8N1E2 194 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 OR2T33Q8NG76 320 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 OR9Q2Q8NGE9 314 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 OR6N2Q8NGY6 317 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 PIFOQ8TCI5 191 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 HPSE2Q8WWQ2 592 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 SDSLQ96GA7 329 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 NSMCE2Q96MF7 247 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 NKX3-1Q99801 234 aaPredicted RBP16.24■□□□□ 0.19
GATC-202ENST00000548171 TSSK6Q9BXA6 273 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 ZNF702PQ9H963 129 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 LYVE1Q9Y5Y7 322 aa16.24■□□□□ 0.19
GATC-202ENST00000548171 MEGF11A6BM72 1044 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 RIIAD1A6NNX1 92 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 H2BFMP0C1H6 154 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 CD28P10747 220 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 CLUP10909 449 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 PSG2P11465 335 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 FAHP16930 419 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 BMXP51813 675 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 ERI1Q8IV48 349 aaKnown RBP16.23■□□□□ 0.19
GATC-202ENST00000548171 MKXQ8IYA7 352 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 PIGCQ92535 297 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 C19orf12Q9NSK7 152 aa16.23■□□□□ 0.19
GATC-202ENST00000548171 RHBDL1O75783 438 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 GASTP01350 101 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 ZNF3P17036 446 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 GSTT1P30711 240 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 GNG3P63215 75 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 ZNF770Q6IQ21 691 aaPredicted RBP16.22■□□□□ 0.19
GATC-202ENST00000548171 THAP5Q7Z6K1 395 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.22■□□□□ 0.19
GATC-202ENST00000548171 OR4Q3Q8NH05 313 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 ZNF671Q8TAW3 534 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 ITFG2Q969R8 447 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 AMELYQ99218 206 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 FGF23Q9GZV9 251 aaPredicted RBP16.22■□□□□ 0.19
GATC-202ENST00000548171 RASL12Q9NYN1 266 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 USE1Q9NZ43 259 aa16.22■□□□□ 0.19
GATC-202ENST00000548171 TNFRSF11BO00300 401 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 PEX14O75381 377 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 SASH3O75995 380 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 PRDX6P30041 224 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 GPM6AP51674 278 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 CAPZA1P52907 286 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 RPL31P62899 125 aaKnown RBP16.21■□□□□ 0.19
GATC-202ENST00000548171 KRT74Q7RTS7 529 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 WIPF2Q8TF74 440 aaPredicted RBP16.21■□□□□ 0.19
GATC-202ENST00000548171 CITED2Q99967 270 aaPredicted RBP16.21■□□□□ 0.19
GATC-202ENST00000548171 OR51I2Q9H344 312 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 CMC2Q9NRP2 79 aa16.21■□□□□ 0.19
GATC-202ENST00000548171 TCF19Q9Y242 345 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms