RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 RNASEK-C17orf49H0YIS7 233 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 NDUFA7O95182 113 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 KNG1P01042 644 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 DAPP51397 102 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 GPM6AP51674 278 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 CRISP1P54107 249 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 SNCBQ16143 134 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 CEP78Q5JTW2 689 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 FAHD1Q6P587 224 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 TREML4Q6UXN2 200 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 BCDIN3DQ7Z5W3 292 aaKnown RBP10.96□□□□□ -0.65
CPSF6-204ENST00000547486 ZDHHC23Q8IYP9 409 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 PNKDQ8N490 385 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 OR4F5Q8NH21 305 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 C8orf46Q8TAG6 207 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 TBC1D15Q8TC07 691 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 WFDC12Q8WWY7 111 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 UTP4Q969X6 686 aaKnown RBP10.96□□□□□ -0.65
CPSF6-204ENST00000547486 YIPF3Q9GZM5 350 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 OR51I2Q9H344 312 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 NIPAL2Q9H841 368 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 BEX1Q9HBH7 125 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 ABCB9Q9NP78 766 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 ZNF391Q9UJN7 358 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 COPS3Q9UNS2 423 aa10.96□□□□□ -0.65
CPSF6-204ENST00000547486 IGKV1D-17A0A075B6S4 117 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 A0A0U1RQV5 110 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 A0A1W2PRD5 423 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 A0A1W2PRF3 423 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 A0A1W2PRM7 423 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF732B4DXR9 585 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 GPR37O15354 613 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 PRKYO43930 277 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 GPR137BO60478 399 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 IGLV3-1P01715 115 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
CPSF6-204ENST00000547486 HOXB6P17509 224 aaKnown RBP10.95□□□□□ -0.66
CPSF6-204ENST00000547486 MAP2K3P46734 347 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 ROM1Q03395 351 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 KLRD1Q13241 179 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 PTGES3Q15185 160 aaKnown RBP10.95□□□□□ -0.66
CPSF6-204ENST00000547486 CEACAM21Q3KPI0 293 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 LRRC10Q5BKY1 277 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 OLFML2AQ68BL7 652 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 DEGS2Q6QHC5 323 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 METAP1DQ6UB28 335 aaPredicted RBP10.95□□□□□ -0.66
CPSF6-204ENST00000547486 LDLRAD3Q86YD5 345 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 OR51E1Q8TCB6 317 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 H1FXQ92522 213 aaKnown RBP10.95□□□□□ -0.66
CPSF6-204ENST00000547486 DYRK2Q92630 601 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 TNFRSF14Q92956 283 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 DMRTB1Q96MA1 342 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 HIST1H2AAQ96QV6 131 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 TTTY10Q9BZA0 68 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 PBOV1Q9GZY1 135 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 DNTTIP1Q9H147 329 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 YY1AP1Q9H869 796 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 PAPOLBQ9NRJ5 636 aaKnown RBP10.95□□□□□ -0.66
CPSF6-204ENST00000547486 NLKQ9UBE8 527 aa10.95□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF816-ZNF321PA0A0X1KG74 233 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 CLPSL1A2RUU4 121 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 ACOD1A6NK06 481 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 OR2AT4A6NND4 320 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 M0R129 80 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 SIGLEC5O15389 551 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 MAGEB4O15481 346 aaPredicted RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 MITFO75030 526 aaPredicted RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 DNAJC8O75937 253 aaPredicted RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 EPHA2P29317 976 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 EFNB1P98172 346 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 MFGE8Q08431 387 aaPredicted RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 TAF9Q16594 264 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 DNAL1Q4LDG9 190 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 KCTD18Q6PI47 426 aaPredicted RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 MOB3CQ70IA8 216 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF679Q8IYX0 411 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 ZNRF1Q8ND25 227 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 LINC01006Q8NI28 216 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 FAM81AQ8TBF8 368 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 BCAS4Q8TDM0 211 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 NRBF2Q96F24 287 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 MED30Q96HR3 178 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 OR8B4Q96RC9 309 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 TEX12Q9BXU0 123 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 CADM1Q9BY67 442 aaKnown RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 MROQ9BYG7 248 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 ELL3Q9HB65 397 aaPredicted RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 GPR84Q9NQS5 396 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 FAM53CQ9NYF3 392 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 SLC25A10Q9UBX3 287 aaPredicted RBP10.94□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF222Q9UK12 451 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 FAM96BQ9Y3D0 163 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 MAB21L2Q9Y586 359 aa10.94□□□□□ -0.66
CPSF6-204ENST00000547486 NKX6-3A6NJ46 265 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 NPFFO15130 113 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 GSC2O15499 205 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF254O75437 659 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 SRSF10O75494 262 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms