RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 HNRNPA0Q13151 305 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 RIN1Q13671 783 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 AGAP6Q5VW22 663 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 JAGN1Q8N5M9 183 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 OR52N4Q8NGI2 321 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 NEUROG1Q92886 237 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 RNF170Q96K19 258 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 CXXC4Q9H2H0 198 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 PLGRKTQ9HBL7 147 aa13.51□□□□□ -0.25
TRAFD1-203ENST00000547063 FAM230AA0A1W2PPH8 454 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 PQLC2LA1A4F0 135 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 IFITM5A6NNB3 132 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 AIPO00170 330 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 SLC17A2O00624 439 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 LILRA1O75019 489 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 ADH4P08319 380 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 CLEC2LP0C7M8 214 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 ZNF182P17025 639 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 CFPP27918 469 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 TLE4Q04727 773 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 KISS1Q15726 138 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 TMEM255AQ5JRV8 349 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 C1orf100Q5SVJ3 147 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 SFXN4Q6P4A7 337 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 ZNF573Q86YE8 665 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 CELF2-AS1Q8N7Q2 184 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 ZNF611Q8N823 705 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 OR6M1Q8NGM8 313 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 TRMT10AQ8TBZ6 339 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 NPRL2Q8WTW4 380 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 KCTD12Q96CX2 325 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 DCUN1D5Q9BTE7 237 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 MSL2Q9HCI7 577 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 DYNLRB1Q9NP97 96 aa13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 MYEF2Q9P2K5 600 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-203ENST00000547063 SPTAN1Q13813 2472 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 ZNF732B4DXR9 585 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 CTAG2O75638 210 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 SRP9P49458 86 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 GPM6AP51674 278 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 SCAND1P57086 179 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 DYNC1I2Q13409 638 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 Q6ZR03 302 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 OR2Z1Q8NG97 314 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 HPSE2Q8WWQ2 592 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 ACOT12Q8WYK0 555 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 ELMOD3Q96FG2 381 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 S100A13Q99584 98 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 CBLN4Q9NTU7 201 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 STEAP1Q9UHE8 339 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 ABCA4P78363 2273 aa13.49□□□□□ -0.25
TRAFD1-203ENST00000547063 A0A0G2JK05 382 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 LRP5LA4QPB2 252 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 ZSCAN5BA6NJL1 495 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 CYB5AP00167 134 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 UBBP0CG47 229 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 HTR2CP28335 458 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 CD200P41217 278 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 ALDH3B1P43353 468 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 OR10A3P58181 314 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 RAB11BQ15907 218 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 SWI5Q1ZZU3 235 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 PCGF3Q3KNV8 242 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 FAM76BQ5HYJ3 339 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 FAM209AQ5JX71 171 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 IDNKQ5T6J7 187 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 MZT2AQ6P582 158 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 OR10AD1Q8NGE0 317 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 GFI1Q99684 422 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 PCDHB16Q9NRJ7 776 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 PTTG2Q9NZH5 202 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 ABRACLQ9P1F3 81 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 GHRLQ9UBU3 117 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 IL19Q9UHD0 177 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 DAPK2Q9UIK4 370 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 A3GALT2U3KPV4 340 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 PMF1-BGLAPU3KQ54 211 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 ROS1P08922 2347 aa13.48□□□□□ -0.25
TRAFD1-203ENST00000547063 SMIM30A4D0T7 59 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 C17orf100A8MU93 164 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 MLNRO43193 412 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 NCR1O76036 304 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 CD55P08174 381 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 PTGFRP43088 359 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 PPOXP50336 477 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 MST1LQ2TV78 715 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 ZNF404Q494X3 552 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 C20orf204Q6ZNR8 217 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 DTX2Q86UW9 622 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 NR2C2APQ86WQ0 139 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 LYPD6Q86Y78 171 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 SAXO1Q8IYX7 474 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 ZSCAN4Q8NAM6 433 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 ZNF671Q8TAW3 534 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 DVL3Q92997 716 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 C14orf79Q96F83 325 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 PSMG3-AS1Q96PY0 264 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 PKIBQ9C010 78 aa13.47□□□□□ -0.25
TRAFD1-203ENST00000547063 EGLN1Q9GZT9 426 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms