RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ZNF92Q03936 586 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 DHRS2Q13268 280 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 PPP1R1AQ13522 171 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 ZMYND11Q15326 602 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF239Q16600 458 aaKnown RBP11.11□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF260Q3ZCT1 412 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 C1orf100Q5SVJ3 147 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF680Q8NEM1 530 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 SEMA6DQ8NFY4 1073 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 KCNG3Q8TAE7 436 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 BORCS8Q96FH0 119 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 TMEM38BQ9NVV0 291 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF716A6NP11 495 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF587BE7ETH6 402 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 F5H5P2 479 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 DHRS3O75911 302 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 MPC2O95563 127 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 CD34P28906 385 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 URM1Q9BTM9 101 aaKnown RBP11.11□□□□□ -0.63
SCAF11-209ENST00000547018 GPR35Q9HC97 309 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 EHFQ9NZC4 300 aa11.11□□□□□ -0.63
SCAF11-209ENST00000547018 NPIPB13A6NJU9 1138 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 NPIPB4C9JG80 1138 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 SLC33A1O00400 549 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-209ENST00000547018 GABRA1P14867 456 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 S100A1P23297 94 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 PIGYQ3MUY2 71 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 HIKESHIQ53FT3 197 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF626Q68DY1 528 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 C3P1Q6ZMU1 363 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 FAM173AQ9BQD7 235 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 GON7Q9BXV9 100 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF850A8MQ14 1090 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 NGFP01138 241 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 DLX5P56178 289 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 HIST3H3Q16695 136 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 MICBQ29980 383 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 CNEP1R1Q8N9A8 125 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 OR13C8Q8NGS7 320 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 SH2D2AQ9NP31 389 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 MED13LQ71F56 2210 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 SSX5O60225 188 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 PRAF2O60831 178 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 MTRF1O75570 445 aaKnown RBP11.1□□□□□ -0.63
SCAF11-209ENST00000547018 OR7C1O76099 320 aaPredicted RBP11.1□□□□□ -0.63
SCAF11-209ENST00000547018 BPNT1O95861 308 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 TGM6O95932 706 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 CXCL2P19875 107 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 LSM6P62312 80 aaKnown RBP11.1□□□□□ -0.63
SCAF11-209ENST00000547018 EXOSC2Q13868 293 aaKnown RBP11.1□□□□□ -0.63
SCAF11-209ENST00000547018 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 CPEB3Q8NE35 698 aaKnown RBP11.1□□□□□ -0.63
SCAF11-209ENST00000547018 RDH8Q9NYR8 311 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 PIPOXQ9P0Z9 390 aa11.1□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF318Q5VUA4 2279 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 CAPZA1P52907 286 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 OPCMLQ14982 345 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 CHRFAM7AQ494W8 412 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 FAM27BQ5VT28 67 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 RAB12Q6IQ22 244 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 NUFIP2Q7Z417 695 aaKnown RBP11.09□□□□□ -0.63
SCAF11-209ENST00000547018 OR5H2Q8NGV7 314 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 UBALD1Q8TB05 177 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 TMEM54Q969K7 222 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 PARD6AQ9NPB6 346 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 PARPBPQ9NWS1 579 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 PRSS50Q9UI38 385 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 FOXD3Q9UJU5 478 aaPredicted RBP11.09□□□□□ -0.63
SCAF11-209ENST00000547018 MCTS1Q9ULC4 181 aaKnown RBP11.09□□□□□ -0.63
SCAF11-209ENST00000547018 RGS13O14921 159 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 HOXB5P09067 269 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 GLRA1P23415 457 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 NFYAP23511 347 aaPredicted RBP11.09□□□□□ -0.63
SCAF11-209ENST00000547018 SCRN3Q0VDG4 424 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 GK2Q14410 553 aaPredicted RBP11.09□□□□□ -0.63
SCAF11-209ENST00000547018 NDUFA5Q16718 116 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 LIX1LQ8IVB5 337 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 ADPRHL1Q8NDY3 354 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 KCNE4Q8WWG9 221 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 FBXW5Q969U6 566 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 SLCO5A1Q9H2Y9 848 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 ZNF703Q9H7S9 590 aaPredicted RBP11.09□□□□□ -0.63
SCAF11-209ENST00000547018 CHMP1AQ9HD42 196 aaPredicted RBP11.09□□□□□ -0.63
SCAF11-209ENST00000547018 RELNP78509 3460 aa11.09□□□□□ -0.63
SCAF11-209ENST00000547018 HIST1H1DP16402 221 aaKnown RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 PER3P56645 1201 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 MRPS34P82930 218 aaKnown RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 P4HA3Q7Z4N8 544 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 FBXL14Q8N1E6 418 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 RELL2Q8NC24 303 aaPredicted RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 TIMM10BQ9Y5J6 103 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 I3L521 148 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 ADAP1O75689 374 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 SCO1O75880 301 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 NRASP01111 189 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 FKBP2P26885 142 aaKnown RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 RAB14P61106 215 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 RAB1AP62820 205 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 238.2 ms