RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 EPPK1P58107 5090 aaKnown RBP10.24□□□□□ -0.77
SCAF11-208ENST00000546534 A0A0G2JND7 137 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 ANXA2P2A6NMY6 339 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 BBIP1A8MTZ0 92 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 RHBDL1O75783 438 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 SERPINA1P01009 418 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 ANXA2P07355 339 aaKnown RBP10.24□□□□□ -0.77
SCAF11-208ENST00000546534 PAICSP22234 425 aaKnown RBP10.24□□□□□ -0.77
SCAF11-208ENST00000546534 IL5RAQ01344 420 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 TIGD6Q17RP2 521 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 SLC35F1Q5T1Q4 408 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 CPLX4Q7Z7G2 160 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 DYDC1Q8WWB3 177 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 FUZQ9BT04 418 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 FGF23Q9GZV9 251 aaPredicted RBP10.24□□□□□ -0.77
SCAF11-208ENST00000546534 KRCC1Q9NPI7 259 aaPredicted RBP10.24□□□□□ -0.77
SCAF11-208ENST00000546534 NDUFAF4Q9P032 175 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 ZNF222Q9UK12 451 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 PITPNC1Q9UKF7 332 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 FAM32AQ9Y421 112 aaKnown RBP10.24□□□□□ -0.77
SCAF11-208ENST00000546534 COMMD3-BMI1R4GMX3 469 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 U3KQK5 164 aa10.24□□□□□ -0.77
SCAF11-208ENST00000546534 BIRC6Q9NR09 4857 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 TCRBV4S1A1TA0A5B7 111 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 C3orf84H3BNL1 204 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 GSTA4O15217 222 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 IDH3BO43837 385 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 DIRAS1O95057 198 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 ALDOBP05062 364 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 SPARCP09486 303 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 PSG2P11465 335 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 DCTDP32321 178 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 CX3CR1P49238 355 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 CAPZA1P52907 286 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 LIPEQ05469 1076 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCAF11-208ENST00000546534 KLF10Q13118 480 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 GFOD2Q3B7J2 385 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 FAM76BQ5HYJ3 339 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 ZNF782Q6ZMW2 699 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-208ENST00000546534 KCTD8Q6ZWB6 473 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 RNF144BQ7Z419 303 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 PROKR2Q8NFJ6 384 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 OR51L1Q8NGJ5 315 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 OR52J3Q8NH60 311 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 OR5P3Q8WZ94 311 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 MYDGFQ969H8 173 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 SP140LQ9H930 580 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 ABCB10Q9NRK6 738 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 ZNF319Q9P2F9 582 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 TSSC4Q9Y5U2 329 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-208ENST00000546534 MPC1Q9Y5U8 109 aa10.23□□□□□ -0.77
SCAF11-208ENST00000546534 RYR2Q92736 4967 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 TMEM210A6NLX4 147 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 ZNF850A8MQ14 1090 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 ZNF878C9JN71 531 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 NHLRC4P0CG21 123 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-208ENST00000546534 CCL3L1P16619 93 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 RHCEP18577 417 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 GLRA1P23415 457 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 SLC25A1P53007 311 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 RPL31P62899 125 aaKnown RBP10.22□□□□□ -0.77
SCAF11-208ENST00000546534 PRDX4Q13162 271 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 SSX2Q16385 188 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 LDLRAD2Q5SZI1 272 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 FAM57BQ71RH2 274 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 PRSS45Q7RTY3 260 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 CENPVQ7Z7K6 275 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-208ENST00000546534 SLC15A3Q8IY34 581 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 CSNK2A3Q8NEV1 391 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 SDSLQ96GA7 329 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 RNF170Q96K19 258 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 DHRS1Q96LJ7 313 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 CHID1Q9BWS9 393 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 YY1AP1Q9H869 796 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 LRP12Q9Y561 859 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 PCDHGB5Q9Y5G0 923 aa10.22□□□□□ -0.77
SCAF11-208ENST00000546534 A0A1W2PPH5 198 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 DHRS12A0PJE2 317 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 F2RL2O00254 374 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 ZNF593O00488 134 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 EDF1O60869 148 aaKnown RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 JUNBP17275 347 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 CFL1P23528 166 aaKnown RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 ACKR3P25106 362 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 SLC15A1P46059 708 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 ENTPD1P49961 510 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 GRB2P62993 217 aaKnown RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 DCTN2Q13561 401 aaKnown RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 LINC00482Q8N8I6 264 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 OR4M1Q8NGD0 313 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 OR2T4Q8NH00 348 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 HPSE2Q8WWQ2 592 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 DPF1Q92782 380 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 FOXRED1Q96CU9 486 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 MALSU1Q96EH3 234 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 C7orf34Q96L11 122 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 INTS9Q9NV88 658 aaKnown RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 USE1Q9NZ43 259 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms