RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SPICQ8N5J4 248 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 OR13C3Q8NGS6 347 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 HPSE2Q8WWQ2 592 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 FGGYQ96C11 551 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 RAB39BQ96DA2 213 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 ZNF665Q9H7R5 613 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 FKBP14Q9NWM8 211 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 ERGIC3Q9Y282 383 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 PPIAL4AQ9Y536 164 aa14.15□□□□□ -0.14
LTBR-215ENST00000546296 ANKRD61A6NGH8 418 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 OR5B21A6NL26 309 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 CDIPTO14735 213 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 CD5LO43866 347 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 GATBO75879 557 aaKnown RBP14.14□□□□□ -0.15
LTBR-215ENST00000546296 ZFPL1O95159 310 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 CDK1P06493 297 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 LMO4P61968 165 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 ZNF154Q13106 437 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 FAM201AQ5SY85 155 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 TMEM42Q69YG0 159 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 MUC20Q8N307 709 aaPredicted RBP14.14□□□□□ -0.15
LTBR-215ENST00000546296 DEFB108BQ8NET1 73 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 RPL3LQ92901 407 aaKnown RBP14.14□□□□□ -0.15
LTBR-215ENST00000546296 C10orf35Q96D05 121 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 PDCD1LG2Q9BQ51 273 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 METTL17Q9H7H0 456 aaPredicted RBP14.14□□□□□ -0.15
LTBR-215ENST00000546296 TRIM36Q9NQ86 728 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 YAE1D1Q9NRH1 226 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 ERVK-18Q9QC07 812 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 SLC7A11Q9UPY5 501 aa14.14□□□□□ -0.15
LTBR-215ENST00000546296 CHD3Q12873 2000 aaKnown RBP14.14□□□□□ -0.15
LTBR-215ENST00000546296 MED13LQ71F56 2210 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 TGFAP01135 160 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 TMEM155Q4W5P6 130 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 C11orf53Q8IXP5 236 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 LINC01356Q8N9X3 169 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 SCCPDHQ8NBX0 429 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 C19orf18Q8NEA5 215 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 OR10AC1Q8NH08 325 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 LRRC29Q8WV35 223 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 PP6455Q8WZ26 134 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 MSI2Q96DH6 328 aaKnown RBP14.13□□□□□ -0.15
LTBR-215ENST00000546296 FGF23Q9GZV9 251 aaPredicted RBP14.13□□□□□ -0.15
LTBR-215ENST00000546296 TMEM165Q9HC07 324 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 DYSFO75923 2080 aa14.13□□□□□ -0.15
LTBR-215ENST00000546296 FAM230AA0A1W2PPH8 454 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 C3orf80F5H4A9 247 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 IGHV2-5P01817 119 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 OCM2P0CE71 109 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 OCMP0CE72 109 aaPredicted RBP14.12□□□□□ -0.15
LTBR-215ENST00000546296 ZNF16P17020 682 aaPredicted RBP14.12□□□□□ -0.15
LTBR-215ENST00000546296 CD80P33681 288 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 KRTAP1-1Q07627 177 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 CDK5R1Q15078 307 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 KCNJ8Q15842 424 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 FAM76BQ5HYJ3 339 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 RBM48Q5RL73 367 aaKnown RBP14.12□□□□□ -0.15
LTBR-215ENST00000546296 SFRP4Q6FHJ7 346 aaPredicted RBP14.12□□□□□ -0.15
LTBR-215ENST00000546296 XAF1Q6GPH4 301 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 WDR82Q6UXN9 313 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 NANOGP1Q8N7R0 232 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 OR51A4Q8NGJ6 313 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 NPRL2Q8WTW4 380 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 TSEN15Q8WW01 171 aaKnown RBP14.12□□□□□ -0.15
LTBR-215ENST00000546296 ADAT3Q96EY9 351 aaPredicted RBP14.12□□□□□ -0.15
LTBR-215ENST00000546296 CCDC90BQ9GZT6 254 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 TLNRD1Q9H1K6 362 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 OR51I2Q9H344 312 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 LPAR2Q9HBW0 351 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 DHDHQ9UQ10 334 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 PCDHGB5Q9Y5G0 923 aa14.12□□□□□ -0.15
LTBR-215ENST00000546296 TRAV38-1A0A0B4J264 116 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 B4DSR2 109 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 FAM157AC9JC47 383 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 LGALS8O00214 317 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 OGG1O15527 345 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 RGS10O43665 173 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 EEF1B2P24534 225 aaKnown RBP14.11□□□□□ -0.15
LTBR-215ENST00000546296 WNT4P56705 351 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 TAS2R43P59537 309 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 GMFBP60983 142 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 HOXA4Q00056 320 aaPredicted RBP14.11□□□□□ -0.15
LTBR-215ENST00000546296 UBE2V2Q15819 145 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 RNLSQ5VYX0 342 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 HAGHLQ6PII5 290 aaPredicted RBP14.11□□□□□ -0.15
LTBR-215ENST00000546296 ZNF573Q86YE8 665 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 ZFP41Q8N8Y5 198 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 ZNF671Q8TAW3 534 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 TRMT10AQ8TBZ6 339 aaKnown RBP14.11□□□□□ -0.15
LTBR-215ENST00000546296 SGCDQ92629 289 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 TECTBQ96PL2 329 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 TMEM246Q9BRR3 403 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 MND1Q9BWT6 205 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 CDCA4Q9BXL8 241 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 CHST5Q9GZS9 411 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 RASSF4Q9H2L5 321 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 PAK1IP1Q9NWT1 392 aaPredicted RBP14.11□□□□□ -0.15
LTBR-215ENST00000546296 BLOC1S6Q9UL45 172 aa14.11□□□□□ -0.15
LTBR-215ENST00000546296 SIRT4Q9Y6E7 314 aaPredicted RBP14.11□□□□□ -0.15
LTBR-215ENST00000546296 PQLC2LA1A4F0 135 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms