RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 LAMP3Q9UQV4 416 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 WSB1Q9Y6I7 421 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF816-ZNF321PA0A0X1KG74 233 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 OR3A4PP47883 348 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 FUT7Q11130 342 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 OVCH2Q7RTZ1 564 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF321PQ8N8H1 164 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 CES1P1Q9UKY3 287 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 SF3B6Q9Y3B4 125 aaKnown RBP10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 PCM1Q15154 2024 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 XIRP1Q702N8 1843 aaKnown RBP10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 PHOX2AO14813 284 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 RER1O15258 196 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 PTP4A3O75365 173 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 GRPP07492 148 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 NMBP08949 121 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 COX5AP20674 150 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 FUT3P21217 361 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 SLC37A1P57057 533 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF573Q86YE8 665 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 RPS4Y2Q8TD47 263 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 SLC39A7Q92504 469 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 SDHCQ99643 169 aaPredicted RBP10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 NPAS1Q99742 590 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 GPR160Q9UJ42 338 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 POLDIP2Q9Y2S7 368 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 COL4A5P29400 1685 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 A0A1W2PPQ1 181 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 F6UZH7 168 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 MPZL1O95297 269 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 GSK3AP49840 483 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF345Q14585 488 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 MOGAT2Q3SYC2 334 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 OR10AC1Q8NH08 325 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 SHARPINQ9H0F6 387 aa10.91□□□□□ -0.66
NPC1L1-204ENST00000546276 SHISA8B8ZZ34 492 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 TMIGD3P0DMS9 266 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 HAAOP46952 286 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 OR10D4PQ8NGN7 298 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ALX4Q9H161 411 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 MRPL22Q9NWU5 206 aaKnown RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 C4orf47A7E2U8 309 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 H3BP45 60 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 CXCL13O43927 109 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 B4GALT1P15291 398 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 TMEM33P57088 247 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF90Q03938 601 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 GGTLC2Q14390 218 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ACOT6Q3I5F7 207 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF528Q3MIS6 628 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 PRAMEF5Q5TYX0 476 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 PRAMEF6Q5VXH4 476 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 CLEC18BQ6UXF7 455 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ZDHHC23Q8IYP9 409 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 NAA60Q9H7X0 242 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 RASL12Q9NYN1 266 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 C5orf49A4QMS7 147 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 DHRS3O75911 302 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 NOVA1P51513 510 aaKnown RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 CD226Q15762 336 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ETFDHQ16134 617 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 PRSS53Q2L4Q9 553 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 JMJD6Q6NYC1 403 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 OR5AS1Q8N127 324 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 SPACA9Q96E40 222 aaPredicted RBP10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 TECTBQ96PL2 329 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 PRSS27Q9BQR3 290 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 LPAR3Q9UBY5 353 aa10.9□□□□□ -0.66
NPC1L1-204ENST00000546276 ASCL1P50553 236 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 OR11G2Q8NGC1 345 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 GPBAR1Q8TDU6 330 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 MITD1Q8WV92 249 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 EXTL1Q92935 676 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 PBX4Q9BYU1 374 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 OPA3Q9H6K4 179 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 CRLF2Q9HC73 371 aa10.9□□□□□ -0.67
NPC1L1-204ENST00000546276 COL11A2P13942 1736 aaPredicted RBP10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 ZNFX1Q9P2E3 1918 aaKnown RBP10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 CENPVL1A0A0U1RR11 272 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 SIRPB1O00241 398 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 ONECUT2O95948 504 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 PGA3P0DJD8 388 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 DTYMKP23919 212 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 RFC3P40938 356 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 IL13RA2Q14627 380 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 BTNL8Q6UX41 500 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 C6orf201Q7Z4U5 140 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 KCNE4Q8WWG9 221 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 WFDC6Q9BQY6 131 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 SCN4AP35499 1836 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 VSIG10L2P0DP72 767 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 FABP4P15090 132 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 GLB1P16278 677 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 EFNB2P52799 333 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 EDDM3AQ14507 147 aa10.89□□□□□ -0.67
NPC1L1-204ENST00000546276 SURF2Q15527 256 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms