RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 MCHR2Q969V1 340 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 TMEM9BQ9NQ34 198 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 AQP7P3A6NL99 342 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 CD1AP06126 327 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 OR10J4P0C629 311 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 NPBWR1P48145 328 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 HLXQ14774 488 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-209ENST00000545689 FXNQ16595 210 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 ZBTB44Q8NCP5 570 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 CLRN3Q8NCR9 226 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF439Q8NDP4 499 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 C17orf47Q8NEP4 570 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 ZG16BQ96DA0 208 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 NUP205Q92621 2012 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 C9orf170A2RU37 121 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 TNFSF15O95150 251 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
COL4A6-209ENST00000545689 CT62P0C5K7 136 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 TSEN54Q7Z6J9 526 aaKnown RBP11.19□□□□□ -0.62
COL4A6-209ENST00000545689 CLDN23Q96B33 292 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 VSTM2LQ96N03 204 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
COL4A6-209ENST00000545689 DHRS2Q13268 280 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 PRSS41Q7RTY9 318 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 AKR7LQ8NHP1 331 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 FAM221AA4D161 298 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 SEMG1P04279 462 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 LCN15Q6UWW0 184 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 ADPRHL1Q8NDY3 354 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 MRPS24Q96EL2 167 aaKnown RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 UFSP2Q9NUQ7 469 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 PDGFBP01127 241 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 SRD5A2P31213 254 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 CD96P40200 585 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 TIGITQ495A1 244 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 DBX2Q6ZNG2 339 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 MUC20Q8N307 709 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 OR10X1Q8NGY0 326 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 WNK3Q9BYP7 1800 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 MYO10Q9HD67 2058 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 CSN1S1P47710 185 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 UBE2G2P60604 165 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 IL13RA2Q14627 380 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 RGS7BPQ6MZT1 257 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 RHBDD2Q6NTF9 364 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 BPIFCQ8NFQ6 507 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 M1APQ8TC57 530 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 MRM2Q9UI43 246 aaKnown RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 A0A1W2PPV9 198 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 TRAF3IP2O43734 574 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 ACSM4P0C7M7 580 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 OR1C1Q15619 314 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 NUFIP2Q7Z417 695 aaKnown RBP11.18□□□□□ -0.62
COL4A6-209ENST00000545689 PRSS42Q7Z5A4 293 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 OR10G3Q8NGC4 313 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 OR1J1Q8NGS3 322 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 OR13D1Q8NGV5 346 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 POMT1Q9Y6A1 747 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 ATP23Q9Y6H3 246 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 PRSS44E7EML9 344 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 B3GALNT1O75752 331 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 IAPPP10997 89 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 FBXL14Q8N1E6 418 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 BATF2Q8N1L9 274 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 FBXO34Q9NWN3 711 aa11.18□□□□□ -0.62
COL4A6-209ENST00000545689 RBBP6Q7Z6E9 1792 aaKnown RBP11.17□□□□□ -0.62
COL4A6-209ENST00000545689 RNASEK-C17orf49H0YIS7 233 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 M0R1B8 84 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 CNIH1O95406 144 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 GPM6AP51674 278 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 FMODQ06828 376 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 SSPNQ14714 243 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 PHYHD1Q5SRE7 291 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 OR6S1Q8NH40 331 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 ALKBH3Q96Q83 286 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-209ENST00000545689 SF3B5Q9BWJ5 86 aaKnown RBP11.17□□□□□ -0.62
COL4A6-209ENST00000545689 URGCP-MRPS24S4R325 110 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 CLEC18AA5D8T8 446 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 K7EQS6 105 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 GABRA4P48169 554 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 PRSS54Q6PEW0 395 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 WDR74Q6RFH5 385 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-209ENST00000545689 TMEM123Q8N131 208 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 CLEC18CQ8NCF0 446 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 ERGIC1Q969X5 290 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 EDEM2Q9BV94 578 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 KIAA1456Q9P272 454 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 EPHA8P29322 1005 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF90Q03938 601 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 RNF212Q495C1 297 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 NPEPL1Q8NDH3 523 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 SMIM7Q9BQ49 75 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 COMMD5Q9GZQ3 224 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 TMEM231Q9H6L2 316 aa11.17□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF355PQ9NSJ1 428 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms