RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 MRPL48Q96GC5 212 aaKnown RBP13.11□□□□□ -0.31
CCDC78-216ENST00000544996 RDH12Q96NR8 316 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 TECTBQ96PL2 329 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 C8orf4Q9NR00 106 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-216ENST00000544996 SLC22A13Q9Y226 551 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 IGHV3OR15-7A0A075B7D8 119 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 IGHV2-70DA0A0C4DH43 119 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 A0A1B0GVI7 797 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 DLGAP1O14490 977 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 TMPRSS2O15393 492 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 SYT7O43581 403 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF85Q03923 595 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 PAX8Q06710 450 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 TP53I3Q53FA7 332 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 ARMCX4Q5H9R4 360 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 CLVS2Q5SYC1 327 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF841Q6ZN19 808 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 ACBD7Q8N6N7 88 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 CCDC54Q8NEL0 328 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF671Q8TAW3 534 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 PLEKHA1Q9HB21 404 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 DNAJB11Q9UBS4 358 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 AASSQ9UDR5 926 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 V9GYS6 101 aa13.1□□□□□ -0.31
CCDC78-216ENST00000544996 A0A0A6YYJ9 748 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 KIR2DS1A0A191URI9 304 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 A0A1B0GTI1 187 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 SRRM5B3KS81 715 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 J3QRE1 110 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 TNFRSF13BO14836 293 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-216ENST00000544996 SLC16A6O15403 523 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 ENSAO43768 121 aaKnown RBP13.09□□□□□ -0.31
CCDC78-216ENST00000544996 PPIAL4GP0DN37 164 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 GABRB1P18505 474 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 FPR2P25090 351 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 ACTA2P62736 377 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 ACTG2P63267 376 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 PAX2Q02962 417 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 RCN1Q15293 331 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 LRRC36Q1X8D7 754 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 ODF4Q2M2E3 257 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 SLC36A1Q7Z2H8 476 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 BPIFB2Q8N4F0 458 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 OR14K1Q8NGZ2 314 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 NUDT16L1Q9BRJ7 211 aaKnown RBP13.09□□□□□ -0.31
CCDC78-216ENST00000544996 FGF23Q9GZV9 251 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-216ENST00000544996 OR51I2Q9H344 312 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 ACOXLQ9NUZ1 547 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 KAAG1Q9UBP8 84 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 CTSZQ9UBR2 303 aa13.09□□□□□ -0.31
CCDC78-216ENST00000544996 EXOGQ9Y2C4 368 aaKnown RBP13.09□□□□□ -0.31
CCDC78-216ENST00000544996 AKR7A2O43488 359 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 FADS2O95864 444 aaKnown RBP13.08□□□□□ -0.32
CCDC78-216ENST00000544996 LIPFP07098 398 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
CCDC78-216ENST00000544996 DBTP11182 482 aaKnown RBP13.08□□□□□ -0.32
CCDC78-216ENST00000544996 CCL1P22362 96 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 GMFBP60983 142 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 DMRTC1Q5HYR2 192 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 WDR38Q5JTN6 314 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 TMEM42Q69YG0 159 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 Q6ZSR3 168 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 ZNF573Q86YE8 665 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 PACRGLQ8N7B6 248 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 SPATA3Q8NHX4 192 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 LGALS12Q96DT0 336 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 SUCNR1Q9BXA5 334 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 GPR173Q9NS66 373 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
CCDC78-216ENST00000544996 RPL36Q9Y3U8 105 aaKnown RBP13.08□□□□□ -0.32
CCDC78-216ENST00000544996 ATRQ13535 2644 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 ANKRD61A6NGH8 418 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 A6NIN4 97 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-216ENST00000544996 DVL1O14640 695 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 ECDO95905 644 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-216ENST00000544996 SERPINA3P01011 423 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 FSHBP01225 129 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 GLRA1P23415 457 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 OR12D2P58182 307 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 ISL1P61371 349 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 RAB40BQ12829 278 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 KLHL22Q53GT1 634 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 HAGHLQ6PII5 290 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-216ENST00000544996 USP43Q70EL4 1123 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 EGFL6Q8IUX8 553 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 PRSS35Q8N3Z0 413 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 PNLDC1Q8NA58 520 aaKnown RBP13.07□□□□□ -0.32
CCDC78-216ENST00000544996 DACT3Q96B18 629 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-216ENST00000544996 JMJD8Q96S16 334 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 CCL13Q99616 98 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 DNTTIP1Q9H147 329 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 WDR13Q9H1Z4 485 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 SMURF1Q9HCE7 757 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 AMBNQ9NP70 447 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms