RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 ATP6V1E1P36543 226 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 GNG3P63215 75 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 SRSF2Q01130 221 aaKnown RBP9.49□□□□□ -0.89
YBX3-216ENST00000544622 MICBQ29980 383 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 CDONQ4KMG0 1287 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 BCL2L15Q5TBC7 163 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 FDX2Q6P4F2 183 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 KCTD20Q7Z5Y7 419 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 EGFL6Q8IUX8 553 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 PRSS35Q8N3Z0 413 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 YIPF7Q8N8F6 280 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 APH1BQ8WW43 257 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 TMEM158Q8WZ71 300 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 RPL3LQ92901 407 aaKnown RBP9.49□□□□□ -0.89
YBX3-216ENST00000544622 LGALS12Q96DT0 336 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 SEH1LQ96EE3 360 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 RNFT2Q96EX2 444 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 FAM71F1Q96KD3 344 aaPredicted RBP9.49□□□□□ -0.89
YBX3-216ENST00000544622 SMURF1Q9HCE7 757 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 OR5V1Q9UGF6 321 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 ENPP5Q9UJA9 477 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 PIGLQ9Y2B2 252 aa9.49□□□□□ -0.89
YBX3-216ENST00000544622 hCG_1807616A0A1W2PRN6 198 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 OR5B21A6NL26 309 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 SNTNA6NMZ2 147 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 ZNF732B4DXR9 585 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 P2RY10O00398 339 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 TCF21O43680 179 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 RHBDL1O75783 438 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 BAG2O95816 211 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 EPHA1P21709 976 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 TGM4P49221 684 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 GPM6AP51674 278 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 ELF3P78545 371 aaPredicted RBP9.48□□□□□ -0.89
YBX3-216ENST00000544622 ZSCAN26Q16670 478 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 DMRTC1Q5HYR2 192 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 WDR38Q5JTN6 314 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 CEP78Q5JTW2 689 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 STUMQ69YW2 141 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 DOK3Q7L591 496 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 THAP5Q7Z6K1 395 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 PHC2Q8IXK0 858 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 BOLLQ8N9W6 283 aaKnown RBP9.48□□□□□ -0.89
YBX3-216ENST00000544622 AQP3Q92482 292 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 UPRTQ96BW1 309 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 HIST1H2AAQ96QV6 131 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 WDR13Q9H1Z4 485 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 RASSF4Q9H2L5 321 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 ACOXLQ9NUZ1 547 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 SMPD3Q9NY59 655 aaPredicted RBP9.48□□□□□ -0.89
YBX3-216ENST00000544622 ERVK-18Q9QC07 812 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 PCDHGB1Q9Y5G3 927 aa9.48□□□□□ -0.89
YBX3-216ENST00000544622 DOCK11Q5JSL3 2073 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 IGHV3OR15-7A0A075B7D8 119 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 A0A1B0GW55 424 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 RNF212BA8MTL3 300 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 TMPRSS2O15393 492 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 AKR7A2O43488 359 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 ADAM20O43506 726 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 WBP4O75554 376 aaKnown RBP9.47□□□□□ -0.89
YBX3-216ENST00000544622 VENTXO95231 258 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 NRASP01111 189 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 IGHA1P01876 353 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 ISG15P05161 165 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4L2P0CJ85 424 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4L3P0CJ86 424 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4L4P0CJ87 422 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4L5P0CJ88 424 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4L6P0CJ89 424 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4L7P0CJ90 424 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DBTP11182 482 aaKnown RBP9.47□□□□□ -0.89
YBX3-216ENST00000544622 KIR3DL2P43630 455 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 OR12D2P58182 307 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 HILS1P60008 231 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 NANOS3P60323 173 aaKnown RBP9.47□□□□□ -0.89
YBX3-216ENST00000544622 ACTC1P68032 377 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 ACTA1P68133 377 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 ZNF91Q05481 1191 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 SCGB2A2Q13296 93 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 TP53I3Q53FA7 332 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 CLVS2Q5SYC1 327 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 CD276Q5ZPR3 534 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 LPCAT4Q643R3 524 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4L9Q6RFH8 374 aaPredicted RBP9.47□□□□□ -0.89
YBX3-216ENST00000544622 BTNL3Q6UXE8 466 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 ZNF788Q6ZQV5 615 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 MOB3CQ70IA8 216 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 COMMD2Q86X83 199 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 ACBD7Q8N6N7 88 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 ANGPTL6Q8NI99 470 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 STMN2Q93045 179 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 Q96MT0 163 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 NUDT16L1Q9BRJ7 211 aaKnown RBP9.47□□□□□ -0.89
YBX3-216ENST00000544622 MRI1Q9BV20 369 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DNTTIP1Q9H147 329 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 FRRS1LQ9P0K9 344 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DUX4Q9UBX2 424 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 NUP50Q9UKX7 468 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 GTF2A1LQ9UNN4 478 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms