RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 M0QYV0 167 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 KMOO15229 486 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 AIFM1O95831 613 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CTSLP07711 333 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF30P17039 623 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 SLC26A3P40879 764 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CSKP41240 450 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CKAP4Q07065 602 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 RSPO1Q2MKA7 263 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 KLHL40Q2TBA0 621 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 Q3ZCU0 254 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 ZBED5Q49AG3 693 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 PTPN20Q4JDL3 420 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 TPRG1LQ5T0D9 272 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CERS6Q6ZMG9 384 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 OR4A15Q8NGL6 344 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 OR10G9Q8NGN4 311 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF596Q8TC21 504 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 DTX3LQ8TDB6 740 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 SERPINB12Q96P63 405 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 NRTNQ99748 197 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 LHX5Q9H2C1 402 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 NANOGQ9H9S0 305 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 LYRM4Q9HD34 91 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 PCYOX1Q9UHG3 505 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 LGALS13Q9UHV8 139 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 U3KQA8 63 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 TENM4Q6N022 2769 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 OR6C74A6NCV1 312 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 A6NDX4 124 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 KLLNB2CW77 178 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 K7ERQ8 282 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 NDUFAB1O14561 156 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CETN3O15182 167 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CLDN11O75508 207 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 FGFR1OPO95684 399 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 C6orf47O95873 294 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CD160O95971 181 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 PRB1P04280 392 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 PAEPP09466 180 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 RHOXF2BP0C7M4 288 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 LCN1P31025 176 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 HRH1P35367 487 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 ANP32AP39687 249 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CRISP3P54108 245 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 UBE2MP61081 183 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 MXD1Q05195 221 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 SLAQ13239 276 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 MAB21L1Q13394 359 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 XRCC4Q13426 336 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CLINT1Q14677 625 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CST6Q15828 149 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 HNRNPA1L2Q32P51 320 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF829Q3KNS6 432 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 OR52W1Q6IF63 320 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 MBOAT1Q6ZNC8 495 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 FAM183BPQ6ZVS7 135 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 SSX9Q7RTT3 188 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 STK40Q8N2I9 435 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 ASCC1Q8N9N2 400 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 Q8N9W7 124 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 NUBPLQ8TB37 319 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 NELFBQ8WX92 580 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 IL22RA2Q969J5 263 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 C8orf44Q96CB5 159 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 TMA16Q96EY4 203 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 P2RX4Q99571 388 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 RHOXF2Q9BQY4 288 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 HDHD3Q9BSH5 251 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 TMEM165Q9HC07 324 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 AGPAT4Q9NRZ5 378 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 MRPL22Q9NWU5 206 aaKnown RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 STOX2Q9P2F5 926 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-207ENST00000544052 CACNG2Q9Y698 323 aa2.51□□□□□ -2.01
SCFD1-207ENST00000544052 KALRNO60229 2985 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 SETXQ7Z333 2677 aaKnown RBP2.5□□□□□ -2.01
SCFD1-207ENST00000544052 NBPF19A0A087WUL8 3843 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 LOC100653049A0A140TA62 436 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 PEX7O00628 323 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 RAD51BO15315 384 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 SUPT3HO75486 399 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 KRT34O76011 436 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 CCNB2O95067 398 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 UBTFL6P0CB48 400 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-207ENST00000544052 CRISP2P16562 243 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 PTNP21246 168 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 HMOX2P30519 316 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 MAS1LP35410 378 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 RPS10P46783 165 aaKnown RBP2.5□□□□□ -2.01
SCFD1-207ENST00000544052 PSMD8P48556 350 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 MRPL19P49406 292 aaKnown RBP2.5□□□□□ -2.01
SCFD1-207ENST00000544052 LHX2P50458 406 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 ADARB1P78563 741 aaKnown RBP2.5□□□□□ -2.01
SCFD1-207ENST00000544052 LRRC63Q05C16 580 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 GGTLC2Q14390 218 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 PON3Q15166 354 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 NKAIN1Q4KMZ8 207 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 BEX5Q5H9J7 111 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms