RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 OR5L2Q8NGL0 311 aa12.08□□□□□ -0.48
VPS33A-208ENST00000543633 POC1BQ8TC44 478 aa12.08□□□□□ -0.48
VPS33A-208ENST00000543633 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
VPS33A-208ENST00000543633 ARV1Q9H2C2 271 aa12.08□□□□□ -0.48
VPS33A-208ENST00000543633 TMEM231Q9H6L2 316 aa12.08□□□□□ -0.48
VPS33A-208ENST00000543633 OR2S2Q9NQN1 319 aa12.08□□□□□ -0.48
VPS33A-208ENST00000543633 V9GYS6 101 aa12.08□□□□□ -0.48
VPS33A-208ENST00000543633 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 H3BML4 177 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 TLX3O43711 291 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-208ENST00000543633 EFNA2O43921 213 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 SPP1P10451 314 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 PTGER4P35408 488 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 DHPSP49366 369 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-208ENST00000543633 OR1D5P58170 312 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 S100A10P60903 97 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 RBM39Q14498 530 aaKnown RBP12.07□□□□□ -0.48
VPS33A-208ENST00000543633 KISS1Q15726 138 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 RNF212Q495C1 297 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 FAM76BQ5HYJ3 339 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 RHBDD2Q6NTF9 364 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 RABEPKQ7Z6M1 372 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 BHLHE23Q8NDY6 225 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 TSTD1Q8NFU3 115 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 FNDC9Q8TBE3 224 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 STT3BQ8TCJ2 826 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 ZNF768Q9H5H4 540 aaKnown RBP12.07□□□□□ -0.48
VPS33A-208ENST00000543633 PRDM6Q9NQX0 595 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 EDARQ9UNE0 448 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 HDGFL3Q9Y3E1 203 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 VCANP13611 3396 aa12.07□□□□□ -0.48
VPS33A-208ENST00000543633 K7EPK0 472 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 FARS2O95363 451 aaKnown RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 IFNA21P01568 189 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 GLRA1P23415 457 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 BLVRBP30043 206 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 RPL12P30050 165 aaKnown RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 NXPH1P58417 271 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 CFHR1Q03591 330 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 IAH1Q2TAA2 248 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 FAM57BQ71RH2 274 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 FAM71E2Q8N5Q1 922 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 CADM4Q8NFZ8 388 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 NUDT22Q9BRQ3 303 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 FGF21Q9NSA1 209 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 KLRF1Q9NZS2 232 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 ZNF319Q9P2F9 582 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 FBXO9Q9UK97 447 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 FAM96BQ9Y3D0 163 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 PCDHGA1Q9Y5H4 931 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 TIMM10BQ9Y5J6 103 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 A0A1W2PP11 408 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 CRYM-AS1A6NIL9 109 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 COLCA2A8K830 154 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 DHRS3O75911 302 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 HTR3BO95264 441 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 S100A8P05109 93 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 PI3P19957 117 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 PTGDSP41222 190 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 SUCLG1P53597 346 aaKnown RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 CRIP3Q6Q6R5 217 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 WDR74Q6RFH5 385 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 FOXL2NBQ6ZUU3 175 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 PGAM5Q96HS1 289 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 KIRREL1Q96J84 757 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 PRRX2Q99811 253 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 SULT4A1Q9BR01 284 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 CHST5Q9GZS9 411 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 DUSP15Q9H1R2 295 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-208ENST00000543633 TUBA4BQ9H853 241 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 CA14Q9ULX7 337 aa12.06□□□□□ -0.48
VPS33A-208ENST00000543633 C2orf72A6NCS6 295 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 AQP7P3A6NL99 342 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 RER1O15258 196 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 PIAS2O75928 621 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 F12P00748 615 aaPredicted RBP12.05□□□□□ -0.48
VPS33A-208ENST00000543633 HOXB5P09067 269 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 SLC2A1P11166 492 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 NME2P22392 152 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 PMELP40967 661 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 UCP2P55851 309 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 SWI5Q1ZZU3 235 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 SULF2Q8IWU5 870 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 RELTQ969Z4 430 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 SHDQ96IW2 340 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 SOX7Q9BT81 388 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 FAM212BQ9NTI7 297 aaPredicted RBP12.05□□□□□ -0.48
VPS33A-208ENST00000543633 FBXL17Q9UF56 701 aa12.05□□□□□ -0.48
VPS33A-208ENST00000543633 TRBV11-1A0A0K0K1C0 115 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 ZNF726A6NNF4 738 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 DHRS7CA6NNS2 312 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 PRSS44E7EML9 344 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 SDCBPO00560 298 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-208ENST00000543633 TOX3O15405 576 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-208ENST00000543633 HEXBP07686 556 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 SFTPBP07988 381 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms