RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 BTNL8Q6UX41 500 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 SIGLEC15Q6ZMC9 328 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 MDP1Q86V88 176 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 OR9Q1Q8NGQ5 310 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 TSSK2Q96PF2 358 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 SLC29A1Q99808 456 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 SPAG8Q99932 426 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 KCNS3Q9BQ31 491 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 ATG101Q9BSB4 218 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 GABARAPL3Q9BY60 117 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 RACGAP1Q9H0H5 632 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 VCXQ9H320 206 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 C8orf4Q9NR00 106 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 POLE4Q9NR33 117 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 FBXL3Q9UKT7 428 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 POLR1DQ9Y2S0 133 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 CACNA1CQ13936 2221 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 IGLV1-36A0A0B4J1U3 117 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 TMEM89A2RUT3 159 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 FAM183AA6NL82 134 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 C12orf71A8MTZ7 269 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 DEFB108AA8MXU0 73 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 DCTN6O00399 190 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 ATP6V1G1O75348 118 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 MPZL1O95297 269 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 GYPBP06028 91 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 CST2P09228 141 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 PATE4P0C8F1 98 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF823P16415 610 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 SPI1P17947 270 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 HNF1AP20823 631 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 EPHA2P29317 976 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 PYCR1P32322 319 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 POLR2IP36954 125 aaKnown RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 IDH3GP51553 393 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 ARHGDIBP52566 201 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 BLVRAP53004 296 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 CDC42P60953 191 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 RPS7P62081 194 aaKnown RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 PLP2Q04941 152 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 BSPH1Q075Z2 132 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 RNF151Q2KHN1 245 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 CD300EQ496F6 205 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 KLHL12Q53G59 568 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 FREM1Q5H8C1 2179 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 C6orf141Q5SZD1 244 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 NCMAPQ5T1S8 102 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 SLX4IPQ5VYV7 408 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 C12orf73Q69YU5 71 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 FOXL2NBQ6ZUU3 175 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 TBC1D26Q86UD7 250 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 PACRGLQ8N7B6 248 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF555Q8NEP9 628 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 OR51L1Q8NGJ5 315 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 OR6K6Q8NGW6 343 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 C11orf40Q8WZ69 217 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 NABP1Q96AH0 204 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 SIGLEC11Q96RL6 698 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 DCLRE1CQ96SD1 692 aaKnown RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 COQ7Q99807 217 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 ALKBH7Q9BT30 221 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-217ENST00000543205 OR51V1Q9H2C8 321 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 B3GNT2Q9NY97 397 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF224Q9NZL3 707 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 NPAP1Q9NZP6 1156 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 MOKQ9UQ07 419 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 TIMM10BQ9Y5J6 103 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 SPG11Q96JI7 2443 aa4.39□□□□□ -1.71
CLIP1-217ENST00000543205 NAV3Q8IVL0 2385 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 IQCMA0A1B0GVH7 501 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 DPRXA6NFQ7 191 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 TVP23AA6NH52 213 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ABCD4O14678 606 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 PLPP2O43688 288 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 PRKYO43930 277 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ZFPL1O95159 310 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 SNAP29O95721 258 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 GPANK1O95872 356 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 PTHP01270 115 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 IGKV3-15P01624 115 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 CRYAAP02489 173 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 CD1BP29016 333 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 FMO3P31513 532 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 LSM6P62312 80 aaKnown RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 AQP6Q13520 282 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ENDOGQ14249 297 aaKnown RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ALKBH6Q3KRA9 238 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 OGFRL1Q5TC84 451 aaPredicted RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 UGT2A3Q6UWM9 527 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 MEPCEQ7L2J0 689 aaKnown RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 NRARPQ7Z6K4 114 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 LAX1Q8IWV1 398 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 TCEANCQ8N8B7 351 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 OR2AJ1Q8NGZ0 328 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 FGFBP3Q8TAT2 258 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 TMEM163Q8TC26 289 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 FBXO17Q96EF6 278 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 RDH12Q96NR8 316 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms