RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 HLA-HP01893 362 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 PMP22Q01453 160 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 RNASE10Q5GAN6 216 aaKnown RBP12.29□□□□□ -0.44
LDB3-207ENST00000542786 CLVS2Q5SYC1 327 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 C9orf135Q5VTT2 229 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 CHMP1BQ7LBR1 199 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 FDCSPQ8NFU4 85 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 ZNF431Q8TF32 576 aaPredicted RBP12.29□□□□□ -0.44
LDB3-207ENST00000542786 Q96M66 194 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 ZNF175Q9Y473 711 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 A0A096LPE4 126 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 A0A1W2PPZ6 126 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 DISC1C4P0D8 188 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 H3BUI4 141 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 XRCC2O43543 280 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 CA11O75493 328 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 PRKACBP22694 351 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 AGTR1P30556 359 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 HRH1P35367 487 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 GNG2P59768 71 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 NDUFA5Q16718 116 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 NKPD1Q17RQ9 610 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 MYO7BQ6PIF6 2116 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 OR2AK2Q8NG84 335 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 GRPEL2Q8TAA5 225 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 PRRT1Q99946 306 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 PRRG4Q9BZD6 226 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 HEXA-AS1Q9H8Q6 139 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 FN3KRPQ9HA64 309 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 GP6Q9HCN6 339 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 UPB1Q9UBR1 384 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 PRSS50Q9UI38 385 aa12.28□□□□□ -0.44
LDB3-207ENST00000542786 OR2AT4A6NND4 320 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 MSTNO14793 375 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 DNASE1P24855 282 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 NBL1P41271 181 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 H2BFSP57053 126 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 RAP2BP61225 183 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 CNN3Q15417 329 aaKnown RBP12.27□□□□□ -0.44
LDB3-207ENST00000542786 MICBQ29980 383 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 VAX1Q5SQQ9 334 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 ZBTB37Q5TC79 503 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 STEAP2Q8NFT2 490 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 OR51T1Q8NGJ9 327 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 FBXW5Q969U6 566 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 PECRQ9BY49 303 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 IFT46Q9NQC8 304 aa12.27□□□□□ -0.44
LDB3-207ENST00000542786 CEACAM4O75871 244 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 IL18BPO95998 194 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 OR4E1P0C645 316 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 SERPINA2P20848 420 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 CCL11P51671 97 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 MTCP1P56278 107 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 CXADRP78310 365 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
LDB3-207ENST00000542786 SIGIRRQ6IA17 410 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 COL25A1Q9BXS0 654 aaPredicted RBP12.27□□□□□ -0.45
LDB3-207ENST00000542786 ARHGAP21Q5T5U3 1957 aa12.27□□□□□ -0.45
LDB3-207ENST00000542786 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 UBE2QL1A1L167 161 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 SLC22A20A6NK97 555 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 FIGNL2A6NMB9 653 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 CEACAM18A8MTB9 384 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 WISP2O76076 250 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 NRASP01111 189 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 CSN2P05814 226 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
LDB3-207ENST00000542786 CLN3Q13286 438 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 MPPED2Q15777 294 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 DCAF12L2Q5VW00 463 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 C17orf107Q6ZR85 190 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 LHFPL2Q6ZUX7 228 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 CD163Q86VB7 1156 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 HOGA1Q86XE5 327 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 ZDHHC22Q8N966 263 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 CCDC107Q8WV48 283 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 BCL2L2Q92843 193 aaPredicted RBP12.26□□□□□ -0.45
LDB3-207ENST00000542786 POM121L2Q96KW2 1035 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
LDB3-207ENST00000542786 CHIAQ9BZP6 476 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 LDAHQ9H6V9 325 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 CRIM1Q9NZV1 1036 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 CLCF1Q9UBD9 225 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 SLC23A1Q9UHI7 598 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 OPN4Q9UHM6 478 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 PLEKHA6Q9Y2H5 1048 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 ZNF292O60281 2723 aa12.26□□□□□ -0.45
LDB3-207ENST00000542786 ZNF816-ZNF321PA0A0X1KG74 233 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 PLSCR5A0PG75 271 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 ANGPTL7O43827 346 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 IL2RAP01589 272 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 TPOP07202 933 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 CPT2P23786 658 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 ZBTB25P24278 435 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 BLVRBP30043 206 aaPredicted RBP12.25□□□□□ -0.45
LDB3-207ENST00000542786 CBX5P45973 191 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms