RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 ADAMTSL3P82987 1691 aa1□□□□□ -2.25
KNTC1-213ENST00000542727 LCTP09848 1927 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 SSH2Q76I76 1423 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 WRBO00258 174 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 PSPHP1O15172 72 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ERI3O43414 337 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 CTNSO60931 367 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 MPDU1O75352 247 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 CATP04040 527 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 INAFM2P0DMQ5 153 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 PRPS1L1P21108 318 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 TGFBR2P37173 567 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 KLF3P57682 345 aaPredicted RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 MTPNP58546 118 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 PAFAH1B2P68402 229 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 IRF8Q02556 426 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 KDSRQ06136 332 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 LRRC74AQ0VAA2 488 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 MAPRE2Q15555 327 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 HADHQ16836 314 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ZNF678Q5SXM1 525 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ZNF660Q6AZW8 331 aaPredicted RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 APOBEC3HQ6NTF7 200 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ITPRIPQ8IWB1 547 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 MICU2Q8IYU8 434 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 OFCC1Q8IZS5 231 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 OR52N1Q8NH53 320 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ZNF420Q8TAQ5 688 aaPredicted RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 TSEN15Q8WW01 171 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ING5Q8WYH8 240 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ISG20Q96AZ6 181 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 OTUB2Q96DC9 234 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 SNF8Q96H20 258 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 IGF2BP2-AS1Q96M15 143 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 RDH12Q96NR8 316 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 OR2V2Q96R30 315 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 TMEM175Q9BSA9 504 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 TRIM45Q9H8W5 580 aaPredicted RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 REEP1Q9H902 201 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 LYRM4Q9HD34 91 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 PARP11Q9NR21 331 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 MRPL22Q9NWU5 206 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 STX18Q9P2W9 335 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 PPIL1Q9Y3C6 166 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 R4GN34 69 aa0.99□□□□□ -2.25
KNTC1-213ENST00000542727 YLPM1P49750 1951 aaKnown RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 COL11A1P12107 1806 aaPredicted RBP0.99□□□□□ -2.25
KNTC1-213ENST00000542727 ELP1O95163 1332 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 SERTM2A0A1B0GWG4 89 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 A0A1W2PRD5 423 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 LRRIQ4A6NIV6 560 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 TRIM64CA6NLI5 447 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 E7EQL1 145 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 LINC01619G3V211 115 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 IGHV1-46P01743 117 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 SEC11BP0C7V7 166 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 OR8G3PP0DMU2 310 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 RGS6P49758 472 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 OR2B8PP59922 312 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 GRB2P62993 217 aaKnown RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 ATP5G2Q06055 141 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 RAD51Q06609 339 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 TNFRSF9Q07011 255 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 ADIGQ0VDE8 80 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 DNAJC3Q13217 504 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 IDI1Q13907 227 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 IL18Q14116 193 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 SLC9A3R2Q15599 337 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 ZNF141Q15928 474 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 RPEL1Q2QD12 228 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 BEX5Q5H9J7 111 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 LDLRAD2Q5SZI1 272 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 CPTPQ5TA50 214 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 STEAP4Q687X5 459 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 TTC19Q6DKK2 380 aaPredicted RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 THOC7Q6I9Y2 204 aaKnown RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 MORN3Q6PF18 240 aaPredicted RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 SMARCD3Q6STE5 483 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 ANGPTL8Q6UXH0 198 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 PAGE2Q7Z2X7 111 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 LRRC8AQ8IWT6 810 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 WDR31Q8NA23 367 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 LRRC75AQ8NAA5 344 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 INO80EQ8NBZ0 244 aaPredicted RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 PHOSPHO2Q8TCD6 241 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 FXYD5Q96DB9 178 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 ZBED3Q96IU2 234 aaPredicted RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 GABRG3Q99928 467 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 AGMATQ9BSE5 352 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 CLSTN2Q9H4D0 955 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 PLEKHF2Q9H8W4 249 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 CES1P1Q9UKY3 287 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 MCTS1Q9ULC4 181 aaKnown RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 ZNF257Q9Y2Q1 563 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 MYO9BQ13459 2157 aa0.98□□□□□ -2.25
KNTC1-213ENST00000542727 BAZ1BQ9UIG0 1483 aaKnown RBP0.98□□□□□ -2.25
KNTC1-213ENST00000542727 NSD2O96028 1365 aa0.97□□□□□ -2.25
KNTC1-213ENST00000542727 TRAV8-6A0A0B4J262 113 aa0.97□□□□□ -2.25
KNTC1-213ENST00000542727 IZUMO1RA6ND01 250 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms