RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 DCDP81605 110 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 H3F3AP84243 136 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 MC2RQ01718 297 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ECH1Q13011 328 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF169Q14929 603 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ATXN7L3Q14CW9 347 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 SURF2Q15527 256 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 C10orf128Q5T292 105 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 PDSS1Q5T2R2 415 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 PRSS54Q6PEW0 395 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 DRAM2Q6UX65 266 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 CLEC18BQ6UXF7 455 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 C8orf86Q6ZUL3 223 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 KCTD9Q7L273 389 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC16A14Q7RTX9 510 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ABHD12BQ7Z5M8 362 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 BAP18Q8IXM2 172 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ARMC10Q8N2F6 343 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 WDSUB1Q8N9V3 476 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ZSCAN4Q8NAM6 433 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 CLRN3Q8NCR9 226 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 OR5T2Q8NGG2 359 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 OR1S2Q8NGQ3 325 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 OR13G1Q8NGZ3 307 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC22A8Q8TCC7 542 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 CASTOR1Q8WTX7 329 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 ARHGAP5-AS1Q96IT6 56 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 LYZL4Q96KX0 146 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 SCGB3A2Q96PL1 93 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 FANCD2OSQ96PS1 177 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 AQP10Q96PS8 301 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 SPACA5Q96QH8 159 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 URM1Q9BTM9 101 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM59Q9BXS4 323 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 SEC61A2Q9H9S3 476 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 PURGQ9UJV8 347 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 CA14Q9ULX7 337 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 FLVCR1Q9Y5Y0 555 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 V9GYS6 101 aa4.56□□□□□ -1.68
ATPAF1-212ENST00000542495 A0A087WZY1 265 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 LY6G6EA0A0G2JKS1 128 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 A0A0U1RQV5 110 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 A0A1W2PP11 408 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C5orf63A6NC05 138 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C5orf51A6NDU8 294 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SIGLEC5O15389 551 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 RRP8O43159 456 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SCRG1O75711 98 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR2J2O76002 312 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ATG12O94817 140 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC2A1P11166 492 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ICAM2P13598 275 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ADCYAP1P18509 176 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 KLK2P20151 261 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OTX1P32242 354 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 THBS4P35443 961 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 STARD6P59095 220 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TAS2R46P59540 309 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC35A1P78382 337 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ENDOGQ14249 297 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PPA1Q15181 289 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SGCAQ16586 387 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 RSPO1Q2MKA7 263 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 MST1LQ2TV78 715 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ANKRD55Q3KP44 614 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM69BQ5VUD6 431 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 UNQ6126/PRO20091Q6UXV3 157 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TMPPEQ6ZT21 453 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM57BQ71RH2 274 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 DTX1Q86Y01 620 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 GTPBP8Q8N3Z3 284 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 POC1AQ8NBT0 407 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CCDC54Q8NEL0 328 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR5H2Q8NGV7 314 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 DCUN1D4Q92564 292 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM54Q969K7 222 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SPACA9Q96E40 222 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM41AQ96HV5 264 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 RCC1LQ96I51 464 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CYYR1Q96J86 154 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 FAM71F1Q96KD3 344 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR5B2Q96R09 309 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR6C1Q96RD1 312 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 RASL10BQ96S79 203 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 NKX6-2Q9C056 277 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC7A5P2Q9GIP4 190 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR10A2Q9H208 303 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC6A15Q9H2J7 730 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 BANF2Q9H503 90 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 METTL7AQ9H8H3 244 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 DECR2Q9NUI1 292 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 DNAJB11Q9UBS4 358 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 MRPS17Q9Y2R5 130 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 POLR1DQ9Y2S0 133 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CARHSP1Q9Y2V2 147 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CHCHD2Q9Y6H1 151 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 U3KQA8 63 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 GON4LQ3T8J9 2241 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms