RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 GSTT2BP0CG30 244 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 UBBP0CG47 229 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 ALDH3B1P43353 468 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 OR3A4PP47883 348 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 BTG1P62324 171 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 SSBP1Q04837 148 aaKnown RBP10.77□□□□□ -0.68
SMAD3-204ENST00000540846 TNK1Q13470 666 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 OR8B8Q15620 311 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 UBE2V2Q15819 145 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 CARTPTQ16568 116 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 ANGPTL5Q86XS5 388 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 WDR31Q8NA23 367 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 LILRB4Q8NHJ6 448 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 AKAP1Q92667 903 aaKnown RBP eCLIP10.77□□□□□ -0.68
SMAD3-204ENST00000540846 HPS1Q92902 700 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 SPACA5Q96QH8 159 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 SCPEP1Q9HB40 452 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 KLK11Q9UBX7 282 aa10.77□□□□□ -0.68
SMAD3-204ENST00000540846 ERRFI1Q9UJM3 462 aaPredicted RBP10.77□□□□□ -0.68
SMAD3-204ENST00000540846 DOPEY1Q5JWR5 2465 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 METTL21EPA6NDL7 271 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 INMT-MINDY4F8WBC2 141 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 RAB27BO00194 218 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 SULT1C2O00338 296 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 MT-ND4P03905 459 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 PRSS3P35030 304 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 TGFBR3Q03167 851 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 FAM27E3Q08E93 113 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 RIPPLY1Q0D2K3 151 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 SNTB2Q13425 540 aaKnown RBP10.77□□□□□ -0.69
SMAD3-204ENST00000540846 KISS1Q15726 138 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 TATDN3Q17R31 274 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 TMEM42Q69YG0 159 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 SEZ6L2Q6UXD5 910 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 C17orf78Q8N4C9 275 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 PNLDC1Q8NA58 520 aaKnown RBP10.77□□□□□ -0.69
SMAD3-204ENST00000540846 GPX8Q8TED1 209 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 NANOS1Q8WY41 292 aaKnown RBP10.77□□□□□ -0.69
SMAD3-204ENST00000540846 FAM46BQ96A09 425 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 SPSB1Q96BD6 273 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 CACNG6Q9BXT2 260 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 HRASLSQ9HDD0 168 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 TAS2R8Q9NYW2 309 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 NUBP2Q9Y5Y2 271 aa10.77□□□□□ -0.69
SMAD3-204ENST00000540846 SPTBN1Q01082 2364 aaKnown RBP10.76□□□□□ -0.69
SMAD3-204ENST00000540846 RBBP9O75884 186 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 LPLP06858 475 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 CSF1P09603 554 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 NAT2P11245 290 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 CD79AP11912 226 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 STOMP27105 288 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 HLA-DMAP28067 261 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 GSK3AP49840 483 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 ASCL1P50553 236 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 RAB1AP62820 205 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 FAM3AP98173 230 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 GUCA2AQ02747 115 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF92Q03936 586 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 TFF3Q07654 80 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 MOGAT2Q3SYC2 334 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 ZBTB37Q5TC79 503 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 GLIPR1L1Q6UWM5 242 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 C22orf34Q6ZV56 151 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 BHLHA15Q7RTS1 189 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-204ENST00000540846 DRAXINQ8NBI3 349 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-204ENST00000540846 KCNG3Q8TAE7 436 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 UBASH3BQ8TF42 649 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 ITLN2Q8WWU7 325 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-204ENST00000540846 POM121L2Q96KW2 1035 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 ELOVL5Q9NYP7 299 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 MYEF2Q9P2K5 600 aaKnown RBP10.76□□□□□ -0.69
SMAD3-204ENST00000540846 GHRLQ9UBU3 117 aa10.76□□□□□ -0.69
SMAD3-204ENST00000540846 C5orf49A4QMS7 147 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 HMX3A6NHT5 357 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 OR5H1A6NKK0 313 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ZG16O60844 167 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 TCRBP04435 133 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 HOXB1P14653 301 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-204ENST00000540846 PRKACBP22694 351 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 GIFP27352 417 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 PTGFRP43088 359 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 RAG2P55895 527 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ACTBP60709 375 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ACTG1P63261 375 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 PLP2Q04941 152 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 CNN3Q15417 329 aaKnown RBP10.75□□□□□ -0.69
SMAD3-204ENST00000540846 FAM189A2Q15884 450 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 TMEM255AQ5JRV8 349 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 CLVS2Q5SYC1 327 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF584Q8IVC4 421 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ZNF101Q8IZC7 436 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ACBD4Q8NC06 268 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 TMEM104Q8NE00 496 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 NPRL2Q8WTW4 380 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 AQP3Q92482 292 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 ITFG2Q969R8 447 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 SEH1LQ96EE3 360 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 CPNE2Q96FN4 548 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-204ENST00000540846 GPER1Q99527 375 aa10.75□□□□□ -0.69
SMAD3-204ENST00000540846 LPAR5Q9H1C0 372 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms