RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RAB40AQ8WXH6 277 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 SLC25A46Q96AG3 418 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 TM4SF19Q96DZ7 209 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 RNFT2Q96EX2 444 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 CNRIP1Q96F85 164 aaPredicted RBP11.19□□□□□ -0.62
DDX55-206ENST00000539934 SLC35G5Q96KT7 338 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 OR2A7Q96R45 310 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 MAGT1Q9H0U3 335 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 GEMIN7Q9H840 131 aaKnown RBP11.19□□□□□ -0.62
DDX55-206ENST00000539934 REEP1Q9H902 201 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 B3GAT2Q9NPZ5 323 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 PIPOXQ9P0Z9 390 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 A0A1W2PR77 199 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 OR2M5A3KFT3 312 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 F8WDY8 70 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 CD79AP11912 226 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 MYF5P13349 255 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 ZBTB25P24278 435 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 LSSP48449 732 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 AKR1C2P52895 323 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 NKX6-1P78426 367 aaPredicted RBP11.19□□□□□ -0.62
DDX55-206ENST00000539934 MAD2L1BPQ15013 274 aaPredicted RBP11.19□□□□□ -0.62
DDX55-206ENST00000539934 DEFB134Q4QY38 66 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 SAMD12Q8N8I0 201 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 RAB8BQ92930 207 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 WNT2BQ93097 391 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 Q9N2J8 555 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 PILRAQ9UKJ1 303 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 ZNF780BQ9Y6R6 833 aa11.19□□□□□ -0.62
DDX55-206ENST00000539934 LRRK2Q5S007 2527 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 A0A087WZY1 265 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 LOC105369274A0A096LPK9 316 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 H0YGG7 62 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 B3GALT2O43825 422 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 TSPAN15O95858 294 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 TK1P04183 234 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 PTGER1P34995 402 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 CSNK1A1P48729 337 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 PPP1CAP62136 330 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 IL13RA1P78552 427 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 IQCJQ1A5X6 159 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 ZNF750Q32MQ0 723 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 ALKBH6Q3KRA9 238 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 CRB2Q5IJ48 1285 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 DCAF12L2Q5VW00 463 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 PRICKLE2Q7Z3G6 844 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 OR4N4Q8N0Y3 316 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 D2HGDHQ8N465 521 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 SAP25Q8TEE9 199 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 SYT4Q9H2B2 425 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 WDR54Q9H977 334 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 HRASLSQ9HDD0 168 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 ELOVL5Q9NYP7 299 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 NINQ8N4C6 2090 aa11.18□□□□□ -0.62
DDX55-206ENST00000539934 SIVA1O15304 175 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 FGF16O43320 207 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 TXNDC12O95881 172 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 ACTL6AO96019 429 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 TNFRSF1BP20333 461 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 FPR1P21462 350 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 BTCP35070 178 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 CLDN12P56749 244 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 PCBP3P57721 371 aaKnown RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 FAM3AP98173 230 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 ZNF57Q68EA5 555 aaPredicted RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 ANKRD34AQ69YU3 496 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 RNF44Q7L0R7 432 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 RTN4RL2Q86UN3 420 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 OR5M3Q8NGP4 307 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 SLC38A5Q8WUX1 472 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 ANKRD9Q96BM1 317 aaPredicted RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 SYT3Q9BQG1 590 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 MEGF9Q9H1U4 602 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 A4GALTQ9NPC4 353 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 NTMQ9P121 344 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 COPS7AQ9UBW8 275 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 CES1P1Q9UKY3 287 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 RNF150Q9ULK6 438 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 LRP12Q9Y561 859 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 UBR5O95071 2799 aaPredicted RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 TMEM229AB2RXF0 380 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 HMGN4O00479 90 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 SMAD7O15105 426 aaKnown RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 NDUFB8O95169 186 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 SMIM10L1P0DMW3 83 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 OR12D1P0DN82 309 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 OR1E2P47887 323 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 RIPPLY3P57055 190 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 FOXL2P58012 376 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 DUSP2Q05923 314 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 RTP5Q14D33 572 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms