RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SRMP19623 302 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 TDGF1P3P51864 188 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 OR10A3P58181 314 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 GRB2P62993 217 aaKnown RBP7.74□□□□□ -1.17
DDB1-213ENST00000539332 LY6DQ14210 128 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 PRR30Q53SZ7 412 aaPredicted RBP7.74□□□□□ -1.17
DDB1-213ENST00000539332 LIN54Q6MZP7 749 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 ZNF627Q7L945 461 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 PRSS45Q7RTY3 260 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 LRRTM1Q86UE6 522 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 BEST4Q8NFU0 473 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 OR51A4Q8NGJ6 313 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 COQ8AQ8NI60 647 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 ZNF671Q8TAW3 534 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 PCNPQ8WW12 178 aaKnown RBP7.74□□□□□ -1.17
DDB1-213ENST00000539332 ASB5Q8WWX0 329 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 RAB40AQ8WXH6 277 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 CXorf58Q96LI9 332 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 SLCO5A1Q9H2Y9 848 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 NOX3Q9HBY0 568 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 GPR35Q9HC97 309 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 CLCF1Q9UBD9 225 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 ASH2LQ9UBL3 628 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 OR52A1Q9UKL2 312 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 MRPS7Q9Y2R9 242 aaKnown RBP7.74□□□□□ -1.17
DDB1-213ENST00000539332 POLR1DQ9Y2S0 133 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 EMC9Q9Y3B6 208 aa7.74□□□□□ -1.17
DDB1-213ENST00000539332 TMEM269A0A1B0GVZ9 245 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 ANKRD20A5PA0PJZ0 165 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 SLC22A20A6NK97 555 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 ARPC1BO15143 372 aaKnown RBP7.73□□□□□ -1.17
DDB1-213ENST00000539332 RER1O15258 196 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 NDUFB6O95139 128 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 APOC1P02654 83 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 TTRP02766 147 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 RPA2P15927 270 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 IGFBP3P17936 291 aaPredicted RBP7.73□□□□□ -1.17
DDB1-213ENST00000539332 ADRA2CP18825 462 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 AGTR1P30556 359 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 GUCA1AP43080 201 aaPredicted RBP7.73□□□□□ -1.17
DDB1-213ENST00000539332 MAGEB1P43366 347 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 VEGFCP49767 419 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 SLC25A35Q3KQZ1 300 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 TMEM244Q5VVB8 128 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 ASPHD2Q6ICH7 369 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 PCSK4Q6UW60 755 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 STAC2Q6ZMT1 411 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 ZNF704Q6ZNC4 412 aaPredicted RBP7.73□□□□□ -1.17
DDB1-213ENST00000539332 Q6ZSR3 168 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 Q6ZTK2 550 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 GJC3Q8NFK1 279 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 PXT1Q8NFP0 134 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 OR1S1Q8NH92 325 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 TMEM106AQ96A25 262 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
DDB1-213ENST00000539332 MS4A3Q96HJ5 214 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 ALKBH3Q96Q83 286 aaPredicted RBP7.73□□□□□ -1.17
DDB1-213ENST00000539332 PRRG4Q9BZD6 226 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 CHIAQ9BZP6 476 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 CRLF2Q9HC73 371 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 CENPMQ9NSP4 180 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 ASF1BQ9NVP2 202 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 PARPBPQ9NWS1 579 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 MBD2Q9UBB5 411 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 HHLA2Q9UM44 414 aa7.73□□□□□ -1.17
DDB1-213ENST00000539332 NOSIPQ9Y314 301 aaKnown RBP7.73□□□□□ -1.17
DDB1-213ENST00000539332 HIVEP3Q5T1R4 2406 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 DIDO1Q9BTC0 2240 aaKnown RBP7.72□□□□□ -1.17
DDB1-213ENST00000539332 TRAV8-7A0A075B6U6 113 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 A0A0D9SG52 128 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 LOC107986453A0A1B0GWG9 222 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 NUDT19A8MXV4 375 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 PRSS44E7EML9 344 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 H3BUI4 141 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 IGLV3-1P01715 115 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 APOC3P02656 99 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 FCGR2AP12318 317 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 CCL1P22362 96 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 CRYGSP22914 178 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 SCAND1P57086 179 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 ZMYND11Q15326 602 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 GUSBP1Q15486 140 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 SGCAQ16586 387 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 KRTAP27-1Q3LI81 207 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 TSPO2Q5TGU0 170 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 KLHL24Q6TFL4 600 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.72□□□□□ -1.17
DDB1-213ENST00000539332 DNAAF1Q8NEP3 725 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 PPP1R14AQ96A00 147 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 FBXO17Q96EF6 278 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 MRPS24Q96EL2 167 aaKnown RBP7.72□□□□□ -1.17
DDB1-213ENST00000539332 PHYHIPLQ96FC7 376 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 CNTNAP3BQ96NU0 1288 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 FOXB1Q99853 325 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 RBM24Q9BX46 236 aaKnown RBP7.72□□□□□ -1.17
DDB1-213ENST00000539332 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 NKX6-2Q9C056 277 aaPredicted RBP7.72□□□□□ -1.17
DDB1-213ENST00000539332 ARL6Q9H0F7 186 aa7.72□□□□□ -1.17
DDB1-213ENST00000539332 OR10A4Q9H209 315 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms