RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TENM1Q9UKZ4 2725 aa9.59□□□□□ -0.87
RTN3-209ENST00000538995 IGHV3OR15-7A0A075B7D8 119 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 NKX6-3A6NJ46 265 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 TTRP02766 147 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 ALPLP05186 524 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 KRT8P05787 483 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 OR2T7P0C7T2 308 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 MMP9P14780 707 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 PRTN3P24158 256 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 POLR2IP36954 125 aaKnown RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 GPM6AP51674 278 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 KPNB1Q14974 876 aaKnown RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 GPR157Q5UAW9 335 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 Q6ZSR3 168 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 ELMOD2Q8IZ81 293 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 SCCPDHQ8NBX0 429 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 OR5A2Q8NGI9 324 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 OR51G2Q8NGK0 314 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 OR2T27Q8NH04 317 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 TRUB1Q8WWH5 349 aaKnown RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 RPL3LQ92901 407 aaKnown RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 GCDHQ92947 438 aaPredicted RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 FAM71F1Q96KD3 344 aaPredicted RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 APOL4Q9BPW4 351 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 TTTY10Q9BZA0 68 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 OR51I2Q9H344 312 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 DNAJB11Q9UBS4 358 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 MRM2Q9UI43 246 aaKnown RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 RPUSD1Q9UJJ7 312 aaKnown RBP9.58□□□□□ -0.88
RTN3-209ENST00000538995 OR52A1Q9UKL2 312 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 SNX5Q9Y5X3 404 aa9.58□□□□□ -0.88
RTN3-209ENST00000538995 DNAJC9-AS1A6NH13 148 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 H3BNX3 289 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 DLGAP1O14490 977 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 FCN3O75636 299 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 SULT1C4O75897 302 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 TOX4O94842 621 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 FAHP16930 419 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 CCL1P22362 96 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 TGM4P49221 684 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 ALDH3A2P51648 485 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 BAMBIQ13145 260 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 PDCD1Q15116 288 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 LRRC10Q5BKY1 277 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 SLC25A30Q5SVS4 291 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 CLVS2Q5SYC1 327 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 METTL11BQ5VVY1 283 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 PLCXD3Q63HM9 321 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 TMEM42Q69YG0 159 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 BTN2A1Q7KYR7 527 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 BCL6BQ8N143 479 aaPredicted RBP9.57□□□□□ -0.88
RTN3-209ENST00000538995 KIR3DL3Q8N743 410 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 CCDC54Q8NEL0 328 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 ST8SIA4Q92187 359 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 MED30Q96HR3 178 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 HRASLS5Q96KN8 279 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 ZNF48Q96MX3 618 aaPredicted RBP9.57□□□□□ -0.88
RTN3-209ENST00000538995 WDFY2Q96P53 400 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 CCL13Q99616 98 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 SIRPDQ9H106 197 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 PRDM13Q9H4Q3 707 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 IMPAD1Q9NX62 359 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.57□□□□□ -0.88
RTN3-209ENST00000538995 GTF2A1LQ9UNN4 478 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 PIGLQ9Y2B2 252 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 KPTNQ9Y664 436 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 V9GYS6 101 aa9.57□□□□□ -0.88
RTN3-209ENST00000538995 A0A1W2PQL4 384 aaPredicted RBP9.56□□□□□ -0.88
RTN3-209ENST00000538995 METTL15A6NJ78 407 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 ZNF732B4DXR9 585 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 E9PQ18 207 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 EI24O14681 340 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 SIGLEC5O15389 551 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 AKR7A2O43488 359 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 NDUFB3O43676 98 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 NRASP01111 189 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 RNASE1P07998 156 aaKnown RBP9.56□□□□□ -0.88
RTN3-209ENST00000538995 ATP6V1E1P36543 226 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 IL13RA1P78552 427 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 CEP78Q5JTW2 689 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 ZNF684Q5T5D7 378 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 ZNF788Q6ZQV5 615 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 SSX6Q7RTT6 188 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 ZNF573Q86YE8 665 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 FAM216BQ8N7L0 139 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 YIPF7Q8N8F6 280 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 LY6G5BQ8NDX9 201 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 C8orf46Q8TAG6 207 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 ZNF671Q8TAW3 534 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 AQP3Q92482 292 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 SLC25A28Q96A46 364 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 EME1Q96AY2 570 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 C1orf147Q96MC9 270 aaPredicted RBP9.56□□□□□ -0.88
RTN3-209ENST00000538995 TBX15Q96SF7 602 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 PCGF1Q9BSM1 259 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 WDR13Q9H1Z4 485 aa9.56□□□□□ -0.88
RTN3-209ENST00000538995 RASSF4Q9H2L5 321 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms