RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GPM6AP51674 278 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 LOXL1Q08397 574 aaPredicted RBP10.98□□□□□ -0.65
CHFR-216ENST00000538235 RNLSQ5VYX0 342 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 WDR82Q6UXN9 313 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 MOB3CQ70IA8 216 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 Q71RC1 249 aaPredicted RBP10.98□□□□□ -0.65
CHFR-216ENST00000538235 ZDHHC23Q8IYP9 409 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 FGFRL1Q8N441 504 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 CELF2-AS1Q8N7Q2 184 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 CHST5Q9GZS9 411 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 EGLN1Q9GZT9 426 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 C1orf123Q9NWV4 160 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 BABAM2Q9NXR7 383 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 MPC1Q9Y5U8 109 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 PQLC2LA1A4F0 135 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 IRGMA1A4Y4 181 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 MAGEA13PA6NCF6 341 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 A6NHS1 94 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 CLDN25C9JDP6 229 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 HAX1O00165 279 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 SYNGR1O43759 233 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 ERCC1P07992 297 aaPredicted RBP10.97□□□□□ -0.65
CHFR-216ENST00000538235 ATP6V1B1P15313 513 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 ZNF16P17020 682 aaPredicted RBP10.97□□□□□ -0.65
CHFR-216ENST00000538235 USF1P22415 310 aaPredicted RBP10.97□□□□□ -0.65
CHFR-216ENST00000538235 TNFSF4P23510 183 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 SRP9P49458 86 aaKnown RBP10.97□□□□□ -0.65
CHFR-216ENST00000538235 GBX2P52951 348 aaPredicted RBP10.97□□□□□ -0.65
CHFR-216ENST00000538235 WNT4P56705 351 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 DSCR9P59020 149 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 SLC3A1Q07837 685 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 RIPPLY1Q0D2K3 151 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 TMEM249Q2WGJ8 235 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 HFEQ30201 348 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 FAM76BQ5HYJ3 339 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 ZBTB37Q5TC79 503 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 PLCXD3Q63HM9 321 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 LYPD2Q6UXB3 125 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 CALHM1Q8IU99 346 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 BATF2Q8N1L9 274 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 SCCPDHQ8NBX0 429 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 OR51A2Q8NGJ7 313 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 TRMT10AQ8TBZ6 339 aaKnown RBP10.97□□□□□ -0.65
CHFR-216ENST00000538235 SMIM19Q96E16 107 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 ZNF488Q96MN9 340 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 WDR13Q9H1Z4 485 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 OR51I2Q9H344 312 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 CTSZQ9UBR2 303 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 SCOCQ9UIL1 159 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 ENPP5Q9UJA9 477 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 NPTNQ9Y639 398 aa10.97□□□□□ -0.65
CHFR-216ENST00000538235 IGHV3OR15-7A0A075B7D8 119 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 TRBV2A0A0J9YWF9 115 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 TRBV5-5A0A0J9YX44 114 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 TMEM212A6NML5 194 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 DHRS7CA6NNS2 312 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 ZNF732B4DXR9 585 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 F8VVB4 439 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 F8VWA3 439 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 CDIPTO14735 213 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 TNFRSF13BO14836 293 aaPredicted RBP10.96□□□□□ -0.65
CHFR-216ENST00000538235 MYL12BO14950 172 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 PIN1P1O15428 100 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 RGS10O43665 173 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 NRASP01111 189 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 LHBP01229 141 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 IGHV2-5P01817 119 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 TNFRSF1AP19438 455 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 GNALP38405 381 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 SOX2P48431 317 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 GP2P55259 537 aaKnown RBP10.96□□□□□ -0.65
CHFR-216ENST00000538235 ZNF181Q2M3W8 571 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 CEACAM21Q3KPI0 293 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 RBM48Q5RL73 367 aaKnown RBP10.96□□□□□ -0.65
CHFR-216ENST00000538235 CLVS2Q5SYC1 327 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 TMEM244Q5VVB8 128 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 RPL22L1Q6P5R6 122 aaKnown RBP10.96□□□□□ -0.65
CHFR-216ENST00000538235 ZNF676Q8N7Q3 588 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 OR8S1Q8NH09 359 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 OR5AK2Q8NH90 309 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 FGGYQ96C11 551 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 RNF170Q96K19 258 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 OPALINQ96PE5 141 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 SPACA5Q96QH8 159 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 SLC22A4Q9H015 551 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 HHLA2Q9UM44 414 aa10.96□□□□□ -0.65
CHFR-216ENST00000538235 WNK2Q9Y3S1 2297 aa10.96□□□□□ -0.66
CHFR-216ENST00000538235 ZFHX3Q15911 3703 aa10.96□□□□□ -0.66
CHFR-216ENST00000538235 CUBNO60494 3623 aa10.96□□□□□ -0.66
CHFR-216ENST00000538235 A6NLC8 198 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 F5H0A9 414 aaPredicted RBP10.95□□□□□ -0.66
CHFR-216ENST00000538235 PCMT1P22061 227 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 TMEM33P57088 247 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 BTG1P62324 171 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 CCDC58Q4VC31 144 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 FAM27D1Q5T7N8 215 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 SFRP4Q6FHJ7 346 aaPredicted RBP10.95□□□□□ -0.66
CHFR-216ENST00000538235 ZNF529Q6P280 563 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms