RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 IL36GQ9NZH8 169 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ZNF224Q9NZL3 707 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 FOXJ2Q9P0K8 574 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 MYEF2Q9P2K5 600 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 SHPKQ9UHJ6 478 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 KIF25Q9UIL4 384 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 KCNK7Q9Y2U2 307 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ZDBF2Q9HCK1 2354 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ARHGAP21Q5T5U3 1957 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 FXYD6-FXYD2A0A087WZ82 144 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ZNF816-ZNF321PA0A0X1KG74 233 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 hCG_38984A0A1B0GV85 526 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 C9orf170A2RU37 121 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 WIPF3A6NGB9 483 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 A6NL46 340 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 FOXI3A8MTJ6 420 aaPredicted RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 PRSS44E7EML9 344 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ERVH48-1M5A8F1 160 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ARPC5O15511 151 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SOCS1O15524 211 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 NME2P1O60361 137 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 B3GALNT1O75752 331 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 OR2F2O95006 317 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TNFSF15O95150 251 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SERPINA5P05154 406 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 CSN2P05814 226 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 RFPL3SP0C7P2 107 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TMEM225BP0DP42 221 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SLC25A4P12235 298 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 B4GALT1P15291 398 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ZNF708P17019 499 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 NME2P22392 152 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 DTYMKP23919 212 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ZBTB25P24278 435 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 BLVRBP30043 206 aaPredicted RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 ARR3P36575 388 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 PMELP40967 661 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 OR3A3P47888 321 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 OR3A2P47893 321 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 FUT6P51993 359 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ATP1B3P54709 279 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 MTCP1P56278 107 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 H2BFSP57053 126 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 UBA52P62987 128 aaKnown RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 IL13RA1P78552 427 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 PSG4Q00888 419 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 OR2F1Q13607 317 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 RSU1Q15404 277 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 OR8B8Q15620 311 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 RSPO1Q2MKA7 263 aaPredicted RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 SNAI3Q3KNW1 292 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 CHRFAM7AQ494W8 412 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ESCO2Q56NI9 601 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TMEM128Q5BJH2 165 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 PLAC9Q5JTB6 97 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TMEM42Q69YG0 159 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ZNF774Q6NX45 483 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 GLRX5Q86SX6 157 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 PEG10Q86TG7 708 aaKnown RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 CD163Q86VB7 1156 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 MCEMP1Q8IX19 187 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 IL22RA1Q8N6P7 574 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ZSCAN4Q8NAM6 433 aaPredicted RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 TMEM178AQ8NBL3 297 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TMEM104Q8NE00 496 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TMEM185AQ8NFB2 350 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 PXT1Q8NFP0 134 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 OR4S1Q8NGB4 309 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TERB2Q8NHR7 220 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 COQ8AQ8NI60 647 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ANGPTL6Q8NI99 470 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SUN5Q8TC36 379 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SCARB1Q8WTV0 552 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 NANOS1Q8WY41 292 aaKnown RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 ROBO4Q8WZ75 1007 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ST8SIA4Q92187 359 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SGK3Q96BR1 496 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 CMBLQ96DG6 245 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ARHGAP5-AS1Q96IT6 56 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 Q96M66 194 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SPACA5Q96QH8 159 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 DHRS9Q9BPW9 319 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 NICN1Q9BSH3 213 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 C1QTNF5Q9BXJ0 243 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 PECRQ9BY49 303 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TTTY12Q9BZ98 90 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 PRRG4Q9BZD6 226 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 GSX2Q9BZM3 304 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 FXYD6Q9H0Q3 95 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 WNT5BQ9H1J7 359 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 BANF2Q9H503 90 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 BCO1Q9HAY6 547 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 ELL3Q9HB65 397 aaPredicted RBP5.79□□□□□ -1.48
USP28-206ENST00000538224 HSF4Q9ULV5 492 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 VSIG4Q9Y279 399 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 AUP1Q9Y679 476 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 SESN1Q9Y6P5 492 aa5.79□□□□□ -1.48
USP28-206ENST00000538224 TNRC6AQ8NDV7 1962 aaKnown RBP5.78□□□□□ -1.48
USP28-206ENST00000538224 KANTRA0A1W2PQU2 76 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 PINLYPA6NC86 204 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms