RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ATP6V1E1P36543 226 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 FOXL1Q12952 345 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 BCDIN3DQ7Z5W3 292 aaKnown RBP17.79■□□□□ 0.44
CCDC78-215ENST00000538176 ELMOD2Q8IZ81 293 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 BCL6BQ8N143 479 aaPredicted RBP17.79■□□□□ 0.44
CCDC78-215ENST00000538176 OR51G2Q8NGK0 314 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 HPSE2Q8WWQ2 592 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 RPL3LQ92901 407 aaKnown RBP17.79■□□□□ 0.44
CCDC78-215ENST00000538176 WDFY2Q96P53 400 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 RAB3IPQ96QF0 476 aaPredicted RBP17.79■□□□□ 0.44
CCDC78-215ENST00000538176 PRDM13Q9H4Q3 707 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 PPP1R3EQ9H7J1 279 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 SMURF1Q9HCE7 757 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 PIGLQ9Y2B2 252 aa17.79■□□□□ 0.44
CCDC78-215ENST00000538176 IGHV3OR15-7A0A075B7D8 119 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 ZNF732B4DXR9 585 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-215ENST00000538176 SRSF10O75494 262 aaKnown RBP17.78■□□□□ 0.44
CCDC78-215ENST00000538176 SULT1C4O75897 302 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 TTRP02766 147 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 TGM4P49221 684 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 GPM6AP51674 278 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 HOXA4Q00056 320 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-215ENST00000538176 WDR38Q5JTN6 314 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 BCL2L15Q5TBC7 163 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 CCDC54Q8NEL0 328 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 ST8SIA4Q92187 359 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 FAM71F1Q96KD3 344 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-215ENST00000538176 CCL13Q99616 98 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 APOL4Q9BPW4 351 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 PCGF1Q9BSM1 259 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 RASSF4Q9H2L5 321 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 OR51I2Q9H344 312 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 RIBC2Q9H4K1 309 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 NOX4Q9NPH5 578 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 RASL12Q9NYN1 266 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 RPUSD1Q9UJJ7 312 aaKnown RBP17.78■□□□□ 0.44
CCDC78-215ENST00000538176 OR52A1Q9UKL2 312 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC78-215ENST00000538176 KPTNQ9Y664 436 aa17.78■□□□□ 0.44
CCDC78-215ENST00000538176 FBN3Q75N90 2809 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 NKX6-3A6NJ46 265 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 DLGAP1O14490 977 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 NRASP01111 189 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 GLRA1P23415 457 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 ZNF684Q5T5D7 378 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 STUMQ69YW2 141 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 MOB3CQ70IA8 216 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 CMTM4Q8IZR5 234 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 C3orf56Q8N813 242 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 PYDC1Q8WXC3 89 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 GTF2A1LQ9UNN4 478 aa17.77■□□□□ 0.44
CCDC78-215ENST00000538176 DNAJC9-AS1A6NH13 148 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 SAC3D1A6NKF1 404 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 SNTNA6NMZ2 147 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 PRR32B1ATL7 298 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 RNASE1P07998 156 aaKnown RBP17.76■□□□□ 0.43
CCDC78-215ENST00000538176 HKR1P10072 659 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 MMP9P14780 707 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 POLR2IP36954 125 aaKnown RBP17.76■□□□□ 0.43
CCDC78-215ENST00000538176 CDONQ4KMG0 1287 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 CEP78Q5JTW2 689 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 SLC25A30Q5SVS4 291 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 CLVS2Q5SYC1 327 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 ZNF788Q6ZQV5 615 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 PLEKHG7Q6ZR37 379 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 Q6ZSR3 168 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 ZNF573Q86YE8 665 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 YIPF7Q8N8F6 280 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 LY6G5BQ8NDX9 201 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 GATAD2BQ8WXI9 593 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 ZDHHC16Q969W1 377 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 TMIGD2Q96BF3 282 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 HRASLS5Q96KN8 279 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 ZNF48Q96MX3 618 aaPredicted RBP17.76■□□□□ 0.43
CCDC78-215ENST00000538176 MYCBPQ99417 103 aaPredicted RBP17.76■□□□□ 0.43
CCDC78-215ENST00000538176 IMPAD1Q9NX62 359 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 USE1Q9NZ43 259 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 NLKQ9UBE8 527 aa17.76■□□□□ 0.43
CCDC78-215ENST00000538176 MRM2Q9UI43 246 aaKnown RBP17.76■□□□□ 0.43
CCDC78-215ENST00000538176 A0A1B0GVI7 797 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 METTL15A6NJ78 407 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 M0R129 80 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 EBAG9O00559 213 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 AKR7A2O43488 359 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 ALPLP05186 524 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 CFPP27918 469 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 IL13RA1P78552 427 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 MFGE8Q08431 387 aaPredicted RBP17.75■□□□□ 0.43
CCDC78-215ENST00000538176 MEDAGQ5VYS4 303 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 PLCXD3Q63HM9 321 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 ANGPTL6Q8NI99 470 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 TTTY10Q9BZA0 68 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 SIRPDQ9H106 197 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 V9GYS6 101 aa17.75■□□□□ 0.43
CCDC78-215ENST00000538176 IGHV3OR16-10A0A075B7F0 116 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 A0A1W2PQL4 384 aaPredicted RBP17.74■□□□□ 0.43
CCDC78-215ENST00000538176 OR2AT4A6NND4 320 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 ACAA1P09110 424 aaPredicted RBP17.74■□□□□ 0.43
CCDC78-215ENST00000538176 FAHP16930 419 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms