RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 RBM24Q9BX46 236 aaKnown RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 MOB1AQ9H8S9 216 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 SLC17A5Q9NRA2 495 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 MYEF2Q9P2K5 600 aaKnown RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 GLS2Q9UI32 602 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 BOKQ9UMX3 212 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 PHF3Q92576 2039 aaKnown RBP9.41□□□□□ -0.9
CLIP1-210ENST00000538120 A0A1B0GWJ7 208 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 OR5H15A6NDH6 313 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 CLN5O75503 358 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 RPA2P15927 270 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 CX3CR1P49238 355 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 GMFBP60983 142 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 AIMP2Q13155 320 aaKnown RBP9.41□□□□□ -0.9
CLIP1-210ENST00000538120 TAF13Q15543 124 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 OR1C1Q15619 314 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 STEAP1BQ6NZ63 245 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 LINC00696Q6ZRV3 163 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF546Q86UE3 836 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 NAA40Q86UY6 237 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 GALNT16Q8N428 558 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 EIF4E3Q8N5X7 224 aaKnown RBP9.41□□□□□ -0.9
CLIP1-210ENST00000538120 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 Q8NFD4 153 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 OR4D6Q8NGJ1 314 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF703Q9H7S9 590 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-210ENST00000538120 BARX1Q9HBU1 254 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-210ENST00000538120 RFPL4AA6NLU0 287 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 RFPL4AL1F8VTS6 287 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 CCSO14618 274 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 HPNP05981 417 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 OR4E1P0C645 316 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 CCL1P22362 96 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 PRSS3P35030 304 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 ATXN7L3Q14CW9 347 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-210ENST00000538120 ATP1A1-AS1Q5TC04 95 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 CLEC2AQ6UVW9 174 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 RNF144BQ7Z419 303 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 OR52N4Q8NGI2 321 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 OR10Z1Q8NGY1 313 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 ULBP2Q9BZM5 246 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 TINAGL1Q9GZM7 467 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-210ENST00000538120 AHCTF1Q8WYP5 2266 aa9.41□□□□□ -0.9
CLIP1-210ENST00000538120 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 KCNAB3O43448 404 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 NDUFA2O43678 99 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 BDKRB2P30411 391 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 LUMP51884 338 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-210ENST00000538120 GRB2P62993 217 aaKnown RBP9.4□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF169Q14929 603 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-210ENST00000538120 TGIF1Q15583 401 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 FAM57BQ71RH2 274 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 GABRG1Q8N1C3 465 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 LRRC18Q8N456 261 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 OR1M1Q8NGA1 313 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 C15orf40Q8WUR7 153 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 FBXO17Q96EF6 278 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 SEC22AQ96IW7 307 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 ATG5Q9H1Y0 275 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 CNTD2Q9H8S5 307 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 GPR84Q9NQS5 396 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 TAS2R3Q9NYW6 316 aa9.4□□□□□ -0.9
CLIP1-210ENST00000538120 SPAARA0A1B0GVQ0 90 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 IGLV3-1P01715 115 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 ITGB2P05107 769 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 CSN2P05814 226 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 ABOP16442 354 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 CASRP41180 1078 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 MRPS34P82930 218 aaKnown RBP9.4□□□□□ -0.91
CLIP1-210ENST00000538120 FAM27BQ5VT28 67 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 OR10K2Q6IF99 312 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 C12orf45Q8N5I9 185 aaPredicted RBP9.4□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF283Q8N7M2 679 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 GJC3Q8NFK1 279 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 STEAP2Q8NFT2 490 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 LYZL4Q96KX0 146 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 IP6K3Q96PC2 410 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 RASL12Q9NYN1 266 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 TAS2R8Q9NYW2 309 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 SLC5A6Q9Y289 635 aa9.4□□□□□ -0.91
CLIP1-210ENST00000538120 PCNX2A6NKB5 2137 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM82A0PJX8 343 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 CYTIPO60759 359 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 FTH1P19P0C7X4 201 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 OTX1P32242 354 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-210ENST00000538120 LHX2P50458 406 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 AKR1C2P52895 323 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 QRFPP83859 136 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 AKR1C1Q04828 323 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 RIPPLY1Q0D2K3 151 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 MPPED2Q15777 294 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 C4orf17Q53FE4 359 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF627Q7L945 461 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 AAED1Q7RTV5 226 aa9.39□□□□□ -0.91
CLIP1-210ENST00000538120 ABHD12BQ7Z5M8 362 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-210ENST00000538120 ADGRE4PQ86SQ3 457 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms