RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ZC4H2Q9NQZ6 224 aa11.32□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SLC2A8Q9NY64 477 aa11.32□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CLCF1Q9UBD9 225 aa11.32□□□□□ -0.6
CDK5RAP3-202ENST00000536708 GDF2Q9UK05 429 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF726A6NNF4 738 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CRYABP02511 175 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TTRP02766 147 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FGF2P09038 288 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 LAP3P28838 519 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 BDKRB2P30411 391 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 S100A11P31949 105 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CSNK1A1P48729 337 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SPOCK1Q08629 439 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF260Q3ZCT1 412 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF627Q7L945 461 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 HSD17B13Q7Z5P4 300 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RPRMLQ8N4K4 120 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 DVL3Q92997 716 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SARAFQ96BY9 339 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SLAMF6Q96DU3 332 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 WDR89Q96FK6 387 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ASF1BQ9NVP2 202 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TUBD1Q9UJT1 453 aa11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FOXD3Q9UJU5 478 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-202ENST00000536708 IGKV3D-15A0A087WSY6 115 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 METTL21EPA6NDL7 271 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 MEIS3P1A6NDR6 274 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 P2RY10O00398 339 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SCGNO76038 276 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 QDPRP09417 244 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 GSK3AP49840 483 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 QRFPP83859 136 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SRSF4Q08170 494 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 GK2Q14410 553 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 HIST3H3Q16695 136 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF585AQ6P3V2 769 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 KLHL24Q6TFL4 600 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ALKAL2Q6UX46 152 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 AAED1Q7RTV5 226 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 JAGN1Q8N5M9 183 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR10H5Q8NGA6 315 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR4D6Q8NGJ1 314 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FBXW5Q969U6 566 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 MOB1AQ9H8S9 216 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CENPMQ9NSP4 180 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TMEM82A0PJX8 343 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 POM121CA8CG34 1229 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RAB27BO00194 218 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 LMX1BO60663 402 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 BPNT1O95861 308 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CYB5AP00167 134 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR4E1P0C645 316 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF35P13682 527 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 GMFBP60983 142 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 MEF2DQ14814 521 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZMYND11Q15326 602 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 MOGAT2Q3SYC2 334 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ACSF3Q4G176 576 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CLVS2Q5SYC1 327 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CORO6Q6QEF8 472 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 PCSK4Q6UW60 755 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 NUFIP2Q7Z417 695 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CD163Q86VB7 1156 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SLC22A24Q8N4F4 322 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 PAQR4Q8N4S7 273 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 BVESQ8NE79 360 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR10S1Q8NGN2 331 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR8S1Q8NH09 359 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TNFAIP8L1Q8WVP5 186 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FGGYQ96C11 551 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 NKX3-1Q99801 234 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 PBOV1Q9GZY1 135 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 POFUT1Q9H488 388 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 C12orf49Q9H741 205 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CNTD2Q9H8S5 307 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TMEM138Q9NPI0 162 aa11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 NOSIPQ9Y314 301 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RTTNQ86VV8 2226 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 LGALS8O00214 317 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 GOSR2O14653 212 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 AGTR1P30556 359 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 KCNMB1Q16558 191 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SLC25A47Q6Q0C1 308 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 C12orf45Q8N5I9 185 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 C9orf106Q8NAJ2 232 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TMEM54Q969K7 222 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ULBP2Q9BZM5 246 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TINAGL1Q9GZM7 467 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RNF122Q9H9V4 155 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 BCO1Q9HAY6 547 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SLC5A6Q9Y289 635 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CACNA1BQ00975 2339 aa11.29□□□□□ -0.6
CDK5RAP3-202ENST00000536708 A0A1B0GTI1 187 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms