RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 OPN1MW2P0DN77 364 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 OPN1MW3P0DN78 364 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 SDC1P18827 310 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 C4BPBP20851 252 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 CD80P33681 288 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 MAGEA4P43358 317 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 IDH2P48735 452 aaKnown RBP4.11□□□□□ -1.75
CLIP1-207ENST00000536634 POLR2HP52434 150 aaKnown RBP4.11□□□□□ -1.75
CLIP1-207ENST00000536634 GLO1Q04760 184 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 FUT5Q11128 374 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 LCP2Q13094 533 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 IMPG1Q17R60 797 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 CEACAM16Q2WEN9 425 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 EIF3MQ7L2H7 374 aaKnown RBP4.11□□□□□ -1.75
CLIP1-207ENST00000536634 CLEC4FQ8N1N0 589 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 OR52E2Q8NGJ4 325 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 GIMAP1Q8WWP7 306 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 CCL17Q92583 94 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 DDIT4LQ96D03 193 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 FCRL1Q96LA6 429 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 CHCHD5Q9BSY4 110 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 LINC00470Q9BZP3 86 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF350Q9GZX5 532 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 FAM107BQ9H098 131 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 OR51B6Q9H340 312 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 RAB9BQ9NP90 201 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 KLHL21Q9UJP4 597 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF346Q9UL40 294 aaKnown RBP4.11□□□□□ -1.75
CLIP1-207ENST00000536634 RABL2BQ9UNT1 228 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 DSPPQ9NZW4 1301 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 IGLV3-9A0A075B6K5 115 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 hCG_38984A0A1B0GV85 526 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 E5RGE8 158 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 SEC22BO75396 215 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 E2F6O75461 281 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 ERLIN1O75477 346 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 C6orf47O95873 294 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 CRYBA1P05813 215 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 MELTFP08582 738 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 CCDC159P0C7I6 412 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 SPP1P10451 314 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 LAMP1P11279 417 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 CD79AP11912 226 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF250P15622 560 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 BCL3P20749 454 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 FKBP2P26885 142 aaKnown RBP4.1□□□□□ -1.75
CLIP1-207ENST00000536634 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
CLIP1-207ENST00000536634 AQP5P55064 265 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 PKNOX1P55347 436 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 GALK2Q01415 458 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 PAX2Q02962 417 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 BNIP2Q12982 314 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 KIAA0141Q14154 515 aaPredicted RBP4.1□□□□□ -1.75
CLIP1-207ENST00000536634 GSG1Q2KHT4 349 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 HFEQ30201 348 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 TRMT5Q32P41 509 aaKnown RBP4.1□□□□□ -1.75
CLIP1-207ENST00000536634 SLC25A30Q5SVS4 291 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 PRAMEF8Q5VWM4 474 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 PRAMEF7Q5VXH5 474 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 DHRS11Q6UWP2 260 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 SLC25A42Q86VD7 318 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 LRRC8AQ8IWT6 810 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 OR9Q2Q8NGE9 314 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 PSMA8Q8TAA3 256 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 FBXO25Q8TCJ0 367 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 ST7LQ8TDW4 575 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 GEMIN6Q8WXD5 167 aaKnown RBP4.1□□□□□ -1.75
CLIP1-207ENST00000536634 RAB1CQ92928 201 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 UPRTQ96BW1 309 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 TIMD4Q96H15 378 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 MID1IP1Q9NPA3 183 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 NECAP2Q9NVZ3 263 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM216Q9P0N5 145 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 SLC7A8Q9UHI5 535 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 SLC35A3Q9Y2D2 325 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 NSG2Q9Y328 171 aa4.1□□□□□ -1.75
CLIP1-207ENST00000536634 PCLOQ9Y6V0 5065 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ZSCAN5BA6NJL1 495 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ANXA2P2A6NMY6 339 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF99A8MXY4 864 aaPredicted RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 K7EIL1 84 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 M0R3G1 203 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 TM9SF1O15321 606 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 RAD51CO43502 376 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 SCN2BO60939 215 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 STX11O75558 287 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 IGHV1-46P01743 117 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 C1QCP02747 245 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 KRT16P08779 473 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 OR8G3PP0DMU2 310 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 THRBP10828 461 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 PNMTP11086 282 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 CCL2P13500 99 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 B4GALT1P15291 398 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 LBPP18428 481 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 IMPDH1P20839 514 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 GPR183P32249 361 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 CDX1P47902 265 aaPredicted RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 NPY4RP50391 375 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms