RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 MED30Q96HR3 178 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 FAM46AQ96IP4 442 aaKnown RBP4.13□□□□□ -1.75
CHD4-205ENST00000536301 RAX2Q96IS3 184 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 TPD52L3Q96J77 140 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 ZNF488Q96MN9 340 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 NOL4LQ96MY1 436 aaPredicted RBP4.13□□□□□ -1.75
CHD4-205ENST00000536301 FAM210AQ96ND0 272 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 CITED4Q96RK1 184 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 NMNAT3Q96T66 252 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 TMEM109Q9BVC6 243 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 GPR61Q9BZJ8 451 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 POLR2J2Q9GZM3 115 aaKnown RBP4.13□□□□□ -1.75
CHD4-205ENST00000536301 DNTTIP1Q9H147 329 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 POLR2J3Q9H1A7 115 aaKnown RBP4.13□□□□□ -1.75
CHD4-205ENST00000536301 HEXA-AS1Q9H8Q6 139 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 EDA2RQ9HAV5 297 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 SSU72Q9NP77 194 aaKnown RBP4.13□□□□□ -1.75
CHD4-205ENST00000536301 RPRD1BQ9NQG5 326 aaKnown RBP4.13□□□□□ -1.75
CHD4-205ENST00000536301 ABCB10Q9NRK6 738 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 NLKQ9UBE8 527 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 SCOCQ9UIL1 159 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 LINC00527Q9UJ94 153 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 SIGLEC7Q9Y286 467 aa4.13□□□□□ -1.75
CHD4-205ENST00000536301 hCG_38984A0A1B0GV85 526 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 TMEM120BA0PK00 339 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 OR6C68A6NDL8 312 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 ANKRD30BLA7E2S9 258 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 NUDT19A8MXV4 375 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 TBX1O43435 398 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 RAMP3O60896 148 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 NDUFB2O95178 105 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 TXNDC12O95881 172 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 ALDOBP05062 364 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 HIST1H1CP16403 213 aaKnown RBP4.12□□□□□ -1.75
CHD4-205ENST00000536301 GLRA1P23415 457 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 ACKR3P25106 362 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 MYCNOSP40205 109 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 NAA10P41227 235 aaPredicted RBP4.12□□□□□ -1.75
CHD4-205ENST00000536301 DYNLT3P51808 116 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 CAPZA1P52907 286 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 RPL31P62899 125 aaKnown RBP4.12□□□□□ -1.75
CHD4-205ENST00000536301 SLC34A1Q06495 639 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 TRAM2Q15035 370 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 C9orf152Q5JTZ5 239 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 GPR139Q6DWJ6 353 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 ZNF730Q6ZMV8 503 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 TMPRSS11FQ6ZWK6 438 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 MBOAT2Q6ZWT7 520 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 TCF23Q7RTU1 214 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 ZDHHC21Q8IVQ6 265 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 KLHL30-AS1Q8NEE0 82 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 OR10Z1Q8NGY1 313 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 OR2AJ1Q8NGZ0 328 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 OR4K13Q8NH42 304 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 SPTSSAQ969W0 71 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 SDSLQ96GA7 329 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 GPX7Q96SL4 187 aaPredicted RBP4.12□□□□□ -1.75
CHD4-205ENST00000536301 SLC25A33Q9BSK2 321 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 MCRIP2Q9BUT9 160 aaKnown RBP4.12□□□□□ -1.75
CHD4-205ENST00000536301 PAPOLGQ9BWT3 736 aaKnown RBP4.12□□□□□ -1.75
CHD4-205ENST00000536301 PITPNC1Q9UKF7 332 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 BAG5Q9UL15 447 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 TBL2Q9Y4P3 447 aaKnown RBP4.12□□□□□ -1.75
CHD4-205ENST00000536301 MUC4Q99102 2169 aa4.12□□□□□ -1.75
CHD4-205ENST00000536301 PSMB11A5LHX3 300 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 RFPL4AA6NLU0 287 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 ZNF850A8MQ14 1090 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 C17orf98A8MV24 154 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 HMGB1P1B2RPK0 211 aaPredicted RBP4.11□□□□□ -1.75
CHD4-205ENST00000536301 RFPL4AL1F8VTS6 287 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 FXYD1O00168 92 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 MMP23AO75900 390 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 LY86O95711 162 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 HLA-DQA2P01906 255 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 HCKP08631 526 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 FRMD6-AS1P0C7T7 363 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 TROVE2P10155 538 aaKnown RBP eCLIP4.11□□□□□ -1.75
CHD4-205ENST00000536301 ZNF823P16415 610 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 PAICSP22234 425 aaKnown RBP4.11□□□□□ -1.75
CHD4-205ENST00000536301 NOS3P29474 1203 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 CRABP1P29762 137 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 GNALP38405 381 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 OMPP47874 163 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 OR3A4PP47883 348 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 GSK3AP49840 483 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 SPIBQ01892 262 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 MZT1Q08AG7 82 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 PRDX4Q13162 271 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 DYNC1I2Q13409 638 aaKnown RBP4.11□□□□□ -1.75
CHD4-205ENST00000536301 SEC23BQ15437 767 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 GFOD2Q3B7J2 385 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 UTF1Q5T230 341 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 AGBL2Q5U5Z8 902 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 ZNF770Q6IQ21 691 aaPredicted RBP4.11□□□□□ -1.75
CHD4-205ENST00000536301 NANOGP8Q6NSW7 305 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 PGM2L1Q6PCE3 622 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 KCTD18Q6PI47 426 aaPredicted RBP4.11□□□□□ -1.75
CHD4-205ENST00000536301 DRAM2Q6UX65 266 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 C16orf89Q6UX73 402 aa4.11□□□□□ -1.75
CHD4-205ENST00000536301 KCTD8Q6ZWB6 473 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms