RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PIGLQ9Y2B2 252 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 PCDHGA1Q9Y5H4 931 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 CFAP54Q96N23 3096 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 SDCBPO00560 298 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 TOR1AO14656 332 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 NUPL2O15504 423 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 CELA2AP08217 269 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 FAHP16930 419 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 GLRA1P23415 457 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 AIMP2Q13155 320 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 ANKRD55Q3KP44 614 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 CHRFAM7AQ494W8 412 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 RAET1LQ5VY80 246 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 M1APQ8TC57 530 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 PAQR8Q8TEZ7 354 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 NPRL2Q8WTW4 380 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 SPTSSAQ969W0 71 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 C2orf50Q96LR7 162 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 METTL8Q9H825 291 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 PROK2Q9HC23 129 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 CYTL1Q9NRR1 136 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 FOXD3Q9UJU5 478 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 SIT1Q9Y3P8 196 aa14.05□□□□□ -0.16
CHMP1A-202ENST00000535997 NUDT19A8MXV4 375 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 M0R135 149 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 UMODP07911 640 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 CD79AP11912 226 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 RPS2P15880 293 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 SERPINA2P20848 420 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 SUCLG1P53597 346 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 FAM27BQ5VT28 67 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 ZNF799Q96GE5 643 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 HPNP05981 417 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 PET100P0DJ07 73 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 CCL3P10147 92 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 COX6A1P12074 109 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 ECI1P42126 302 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 ZNF84P51523 738 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 SSR4P51571 173 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 RAC1P63000 192 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 NKAPLQ5M9Q1 402 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 NARS2Q96I59 477 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 CYYR1Q96J86 154 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 AQP10Q96PS8 301 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 UCN2Q96RP3 112 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 SLC6A15Q9H2J7 730 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 SH2D2AQ9NP31 389 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 PLEK2Q9NYT0 353 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 DNAJB11Q9UBS4 358 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 PTRH2Q9Y3E5 179 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 CNTRLQ7Z7A1 2325 aa14.04□□□□□ -0.16
CHMP1A-202ENST00000535997 IGHV3-15A0A0B4J1V0 119 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 TMEM218A2RU14 115 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 DNASE2O00115 360 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 CBR3O75828 277 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 KLF7O75840 302 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 HTR3BO95264 441 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 IL15RAQ13261 267 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 STK11Q15831 433 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 MAML2Q8IZL2 1156 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 ZIC4Q8N9L1 334 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 ROBO4Q8WZ75 1007 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 HLA-CQ95604 372 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 OR10C1Q96KK4 312 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 PIGQQ9BRB3 760 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 AIFM2Q9BRQ8 373 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 PILRBQ9UKJ0 227 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 WDFY3Q8IZQ1 3526 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 SDK2Q58EX2 2172 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 DHRS7CA6NNS2 312 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 GDF9O60383 454 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 ATG12O94817 140 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 MRPS34P82930 218 aaKnown RBP14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 GALNTL5Q7Z4T8 443 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 C20orf196Q8IYI0 205 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 IFI44Q8TCB0 444 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 MR1Q95460 341 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 SGK3Q96BR1 496 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 ULBP2Q9BZM5 246 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 NKX6-2Q9C056 277 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 ELL3Q9HB65 397 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 ASF1BQ9NVP2 202 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 DKKL1Q9UK85 242 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 PRELID1Q9Y255 219 aa14.03□□□□□ -0.16
CHMP1A-202ENST00000535997 RRP8O43159 456 aaKnown RBP14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 CCDC157Q569K6 752 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 DRAM2Q6UX65 266 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 RPS19BP1Q86WX3 136 aaKnown RBP14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 DTX1Q86Y01 620 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 TMEM156Q8N614 296 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 FBXO17Q96EF6 278 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 SF3B5Q9BWJ5 86 aaKnown RBP14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 FSCN3Q9NQT6 498 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 PLEKHJ1Q9NW61 149 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 OR5AC2Q9NZP5 309 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 C14orf166Q9Y224 244 aaKnown RBP14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 MEMO1Q9Y316 297 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 HS3ST3B1Q9Y662 390 aa14.02□□□□□ -0.16
CHMP1A-202ENST00000535997 CCDC163A0A0D9SF12 145 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 A0A0J9YW62 118 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms