RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 APOC1P02654 83 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 LIPCP11150 499 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 SLC25A4P12235 298 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF32P17041 273 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 ITGA3P26006 1051 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 RAB35Q15286 201 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 CEACAM16Q2WEN9 425 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 JMJD6Q6NYC1 403 aaPredicted RBP11.68□□□□□ -0.54
VPS33B-202ENST00000535906 MITD1Q8WV92 249 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 CPNE4Q96A23 557 aaPredicted RBP11.68□□□□□ -0.54
VPS33B-202ENST00000535906 PDCD10Q9BUL8 212 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF703Q9H7S9 590 aaPredicted RBP11.68□□□□□ -0.54
VPS33B-202ENST00000535906 PLA2G3Q9NZ20 509 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 SPEF1Q9Y4P9 236 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 PCNX2A6NKB5 2137 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 C9orf170A2RU37 121 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 RAD51DO75771 328 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 UBBP0CG47 229 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
VPS33B-202ENST00000535906 RPS27AP62979 156 aaKnown RBP11.68□□□□□ -0.54
VPS33B-202ENST00000535906 UBA52P62987 128 aaKnown RBP11.68□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF345Q14585 488 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 HES3Q5TGS1 186 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 C11orf87Q6NUJ2 197 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 SULF2Q8IWU5 870 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 PDZD9Q8IXQ8 264 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 SLC38A6Q8IZM9 456 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 PNLDC1Q8NA58 520 aaKnown RBP11.68□□□□□ -0.54
VPS33B-202ENST00000535906 OR1S1Q8NH92 325 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 AKR7LQ8NHP1 331 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 FGFBP3Q8TAT2 258 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 PP6455Q8WZ26 134 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 LINC00052Q96N35 136 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 PHB2Q99623 299 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 FOXB1Q99853 325 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 COMMD9Q9P000 198 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 OR2AT4A6NND4 320 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 A8MXK9 166 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 MTRF1O75570 445 aaKnown RBP11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OR2F2O95006 317 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 TNFSF15O95150 251 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 RLN2P04090 185 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 IFNA6P05013 189 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 NAT2P11245 290 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 FCGR2AP12318 317 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 ACKR3P25106 362 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
VPS33B-202ENST00000535906 PRSS12P56730 875 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 IL13RA1P78552 427 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 SRYQ05066 204 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 EIF3IQ13347 325 aaKnown RBP11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OR2F1Q13607 317 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OR1C1Q15619 314 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 DRAM2Q6UX65 266 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 LINC00696Q6ZRV3 163 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 KCNRGQ8N5I3 272 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 GALNT11Q8NCW6 608 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OR1F12Q8NHA8 337 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 PIGTQ969N2 578 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 ARHGAP5-AS1Q96IT6 56 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 DMRTA2Q96SC8 542 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OR10A2Q9H208 303 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 TNFSF18Q9UNG2 199 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 KRBOX1C9JBD0 128 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 CCSO14618 274 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 IGHV3-9P01782 118 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 PMP2P02689 132 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 GSTP1P09211 210 aaKnown RBP11.67□□□□□ -0.54
VPS33B-202ENST00000535906 ALDH3B1P43353 468 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 LHX2P50458 406 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 PSG4Q00888 419 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 RIPPLY2Q5TAB7 128 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 OVCH2Q7RTZ1 564 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 GLRX5Q86SX6 157 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 ST8SIA2Q92186 375 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 ST8SIA4Q92187 359 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 GPR35Q9HC97 309 aa11.67□□□□□ -0.54
VPS33B-202ENST00000535906 TTC28Q96AY4 2481 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 FREM1Q5H8C1 2179 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 LOC105371267A0A1B0GV96 52 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 OR6C6A6NF89 314 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 FGF2P09038 288 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF806P0C7X5 589 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 NAT1P18440 290 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 NUP62P37198 522 aaPredicted RBP11.66□□□□□ -0.54
VPS33B-202ENST00000535906 MAGEA5P43359 124 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 SCRN3Q0VDG4 424 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 HSD17B13Q7Z5P4 300 aaPredicted RBP11.66□□□□□ -0.54
VPS33B-202ENST00000535906 FAM89BQ8N5H3 189 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 OR56B1Q8NGI3 324 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 OR51T1Q8NGJ9 327 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 OR4K15Q8NH41 348 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 PPP1R1CQ8WVI7 109 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 HAS2Q92819 552 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 C10orf35Q96D05 121 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
VPS33B-202ENST00000535906 URM1Q9BTM9 101 aaKnown RBP11.66□□□□□ -0.54
VPS33B-202ENST00000535906 SLC25A32Q9H2D1 315 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms