RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 INTS14Q96SY0 518 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 FGF23Q9GZV9 251 aaPredicted RBP9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 WDR13Q9H1Z4 485 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 OR51I2Q9H344 312 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 SEBOXQ9HB31 216 aaPredicted RBP9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 SIRT7Q9NRC8 400 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 TNFRSF19Q9NS68 423 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 CENPMQ9NSP4 180 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 ONECUT1Q9UBC0 465 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 RRP15Q9Y3B9 282 aaKnown RBP9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 IGHV3OR15-7A0A075B7D8 119 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 TCRBV5S2A0A599 114 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 MEIOCA2RUB1 952 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 OR2AT4A6NND4 320 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 RIIAD1A6NNX1 92 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 PRODHO43272 600 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 MTRF1O75570 445 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 ATP5HO75947 161 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 CCNB2O95067 398 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 RBP4P02753 201 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 ZNF3P17036 446 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 GSTT1P30711 240 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 PSMA6P60900 246 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 ELF3P78545 371 aaPredicted RBP9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 SF3A3Q12874 501 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 BLMHQ13867 455 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 CEACAM21Q3KPI0 293 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 LCN8Q6JVE9 175 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 CCDC121Q6ZUS5 278 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 OR5A2Q8NGI9 324 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 SEH1LQ96EE3 360 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 DUS3LQ96G46 650 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 CDRT15Q96T59 188 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 AMELYQ99218 206 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 PAPOLGQ9BWT3 736 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 NLKQ9UBE8 527 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 DNAJB9Q9UBS3 223 aa9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 KMT2CQ8NEZ4 4911 aaKnown RBP9.12□□□□□ -0.95
CLSTN3-206ENST00000535668 NKX6-3A6NJ46 265 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 OR5B21A6NL26 309 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 PAHP00439 452 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 GYPBP06028 91 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 ANXA2P07355 339 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 CLUP10909 449 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 PSG2P11465 335 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 ALOX5APP20292 161 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 HSD11B1P28845 292 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 MNAT1P51948 309 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 GNG3P63215 75 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 ROM1Q03395 351 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 EMX1Q04741 257 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 POU4F2Q12837 409 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 PRDX4Q13162 271 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 EIF2B1Q14232 305 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 LRRC75BQ2VPJ9 315 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 SLC35D3Q5M8T2 416 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 TMEM42Q69YG0 159 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 OR2T5Q6IEZ7 315 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 Q6ZPA2 131 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 FAM57BQ71RH2 274 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 AQP11Q8NBQ7 271 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 OR4C13Q8NGP0 309 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 OR2T29Q8NH02 315 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 AQP3Q92482 292 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 LYZL4Q96KX0 146 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 SSX3Q99909 188 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 WNT10AQ9GZT5 417 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 SEMA6AQ9H2E6 1030 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 PPP1R3EQ9H7J1 279 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 HEXA-AS1Q9H8Q6 139 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 TBC1D23Q9NUY8 699 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 DNAJB11Q9UBS4 358 aa9.11□□□□□ -0.95
CLSTN3-206ENST00000535668 A0A1W2PPH5 198 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 DHRS7CA6NNS2 312 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 TBX1O43435 398 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 XPNPEP2O43895 674 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 LYNP07948 512 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 SELLP14151 372 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 MPZP25189 248 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 IKZF1Q13422 519 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 C16orf89Q6UX73 402 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 TRPM8Q7Z2W7 1104 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 ZDHHC23Q8IYP9 409 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 ZNF561Q8N587 486 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 OR6K6Q8NGW6 343 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 OR2T6Q8NHC8 308 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 ZNF671Q8TAW3 534 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 RPL3LQ92901 407 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 NPFFR1Q9GZQ6 430 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 PPA2Q9H2U2 334 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 HES4Q9HCC6 221 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 SERTAD4Q9NUC0 356 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 TAGLN3Q9UI15 199 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 ARL2BPQ9Y2Y0 163 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
CLSTN3-206ENST00000535668 ANKRD61A6NGH8 418 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 ZNF850A8MQ14 1090 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 H3BUX3 64 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 AKR7A2O43488 359 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 ZNF254O75437 659 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms