RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 IFNA7P01567 189 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 SERPINA5P05154 406 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CRHP06850 196 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 NMBP08949 121 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 HSMCR30P0CW71 290 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 COX5BP10606 129 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 RNH1P13489 461 aaKnown RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 SELEP16581 610 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 IL1RNP18510 177 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ATP5A1P25705 553 aaKnown RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 RORAP35398 523 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ELK3P41970 407 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 GPR1P46091 355 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CCR4P51679 360 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ZNF140P52738 457 aaPredicted RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 TAS2R60P59551 318 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 KRTAP10-1P60331 282 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CCL7P80098 99 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ZFP36L1Q07352 338 aaKnown RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 PUDPQ08623 228 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 STX5Q13190 355 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 MEF2DQ14814 521 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ELOCQ15369 112 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ZSWIM7Q19AV6 140 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 TMEM44Q2T9K0 475 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 C10orf91Q5T1B1 145 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 C1orf189Q5VU69 101 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 LYPLAL1Q5VWZ2 237 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 LIPJQ5W064 366 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 OR5M10Q6IEU7 315 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CAPN13Q6MZZ7 669 aaPredicted RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 ERICH5Q6P6B1 374 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ZCCHC23Q6ZST2 131 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 PID1Q7Z2X4 250 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 SLC25A42Q86VD7 318 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 COMTD1Q86VU5 262 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 DHFR2Q86XF0 187 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 GKN2Q86XP6 184 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 OFCC1Q8IZS5 231 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 C8orf59Q8N0T1 100 aaPredicted RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 PDIK1LQ8N165 341 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 FGFRL1Q8N441 504 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 TRAM1L1Q8N609 369 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CSNK1G2-AS1Q8NCQ2 148 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 OR13C4Q8NGS5 318 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 OR4L1Q8NH43 312 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 OR6X1Q8NH79 312 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 WDR36Q8NI36 951 aaKnown RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 RDH11Q8TC12 318 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 MITD1Q8WV92 249 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CYGBQ8WWM9 190 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 RORBQ92753 470 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 PITX2Q99697 317 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 HOPXQ9BPY8 73 aaPredicted RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 C19orf43Q9BQ61 176 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 APOL2Q9BQE5 337 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 C2orf88Q9BSF0 95 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 DPH7Q9BTV6 452 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 MED18Q9BUE0 208 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 IL22Q9GZX6 179 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ILKAPQ9H0C8 392 aaPredicted RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 GABARAPL1Q9H0R8 117 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 C5orf66Q9H5L9 145 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 TMEM185BQ9H7F4 350 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 CCNB1IP1Q9NPC3 277 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 IL26Q9NPH9 171 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ACOT13Q9NPJ3 140 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ASCL3Q9NQ33 180 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 UFSP2Q9NUQ7 469 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 MCUBQ9NWR8 336 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ONECUT1Q9UBC0 465 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 MARCOQ9UEW3 520 aaPredicted RBP2.7□□□□□ -1.98
USP48-215ENST00000534705 SLC23A2Q9UGH3 650 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 DCDC2Q9UHG0 476 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 PHF11Q9UIL8 331 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 PILRAQ9UKJ1 303 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 SPATA2Q9UM82 520 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 RNF6Q9Y252 685 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 SLC9A8Q9Y2E8 581 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 SLC6A5Q9Y345 797 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 ARL5AQ9Y689 179 aa2.7□□□□□ -1.98
USP48-215ENST00000534705 GCN1Q92616 2671 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 HIVEP3Q5T1R4 2406 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 FASNP49327 2511 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 NINQ8N4C6 2090 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 IGLV3-16A0A075B6K0 115 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 IGHV1OR21-1A0A087WYE8 117 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SMCO3A2RU48 225 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CCDC182A6NF36 153 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 BBIP1A8MTZ0 92 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ARHGEF33A8MVX0 844 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 EFCAB9A8MZ26 197 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 C2orf74A8MZ97 194 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 D6RAR5 112 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 AIPO00170 330 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CCL22O00626 93 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 PRMT5O14744 637 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 PHYHO14832 338 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 MYL12BO14950 172 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms