RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 MESTQ5EB52 335 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 MINOS1Q5TGZ0 78 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 SLC2A7Q6PXP3 512 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 MSANTD1Q6ZTZ1 278 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 TRMT10CQ7L0Y3 403 aaKnown RBP5.04□□□□□ -1.6
CD44-237ENST00000534082 CPLX4Q7Z7G2 160 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 ANKRD13BQ86YJ7 626 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 NKAIN4Q8IVV8 208 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 DPP10Q8N608 796 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 COMMD1Q8N668 190 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 LRRC75AQ8NAA5 344 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 GPR32P1Q8NGA4 272 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 OR11H6Q8NGC7 330 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 NDNFQ8TB73 568 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 TMEM239Q8WW34 195 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 APOPT1Q96IL0 206 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 RBM14Q96PK6 669 aaKnown RBP5.04□□□□□ -1.6
CD44-237ENST00000534082 ATF6BQ99941 703 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 TLNRD1Q9H1K6 362 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 DCLRE1BQ9H816 532 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 NLKQ9UBE8 527 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 COA3Q9Y2R0 106 aaPredicted RBP5.04□□□□□ -1.6
CD44-237ENST00000534082 SIRT4Q9Y6E7 314 aaPredicted RBP5.04□□□□□ -1.6
CD44-237ENST00000534082 MINOS1-NBL1R4GNA1 71 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 PKD1P98161 4303 aa5.04□□□□□ -1.6
CD44-237ENST00000534082 SMIM23A6NLE4 172 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ANKRD30BLA7E2S9 258 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 SERPINE3A8MV23 424 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 M0QZK8 103 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 M0R135 149 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 XKRYO14609 159 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 AKR7A2O43488 359 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ITM2AO43736 263 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 SLC16A7O60669 478 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 KHDRBS3O75525 346 aaKnown RBP5.03□□□□□ -1.6
CD44-237ENST00000534082 OR5F1O95221 314 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 HOXB9P17482 250 aaPredicted RBP5.03□□□□□ -1.6
CD44-237ENST00000534082 GNALP38405 381 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 POU3F4P49335 361 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 IL18R1Q13478 541 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 KRT72Q14CN4 511 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 SNAPC1Q16533 368 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 HAGHQ16775 308 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 MEP1BQ16820 701 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 GLYATL3Q5SZD4 288 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 TMPRSS11FQ6ZWK6 438 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ZNF429Q86V71 674 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 MICU2Q8IYU8 434 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 OR4M1Q8NGD0 313 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 OR10Z1Q8NGY1 313 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ST6GALNAC6Q969X2 333 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ZNF799Q96GE5 643 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ZNF570Q96NI8 536 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 PITX2Q99697 317 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 FAM110AQ9BQ89 295 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ST6GALNAC5Q9BVH7 336 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 PAIP1Q9H074 479 aaKnown RBP5.03□□□□□ -1.6
CD44-237ENST00000534082 SYT4Q9H2B2 425 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 RETNQ9HD89 108 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 TBC1D23Q9NUY8 699 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 GRHPRQ9UBQ7 328 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 LINC00527Q9UJ94 153 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ZNF222Q9UK12 451 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 MED31Q9Y3C7 131 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 ADAM18Q9Y3Q7 739 aa5.03□□□□□ -1.6
CD44-237ENST00000534082 TRAV27A0A087WT01 109 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 C17orf98A8MV24 154 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 A8MZ25 164 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 H3BSH0 61 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 CCRL2O00421 344 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 IMPA2O14732 288 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 AHCYL1O43865 530 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 SAP30O75446 220 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 PSG2P11465 335 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 PIPP12273 146 aaPredicted RBP5.02□□□□□ -1.61
CD44-237ENST00000534082 ZNF823P16415 610 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 BRS3P32247 399 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 MDH1P40925 334 aaKnown RBP5.02□□□□□ -1.61
CD44-237ENST00000534082 DLX6P56179 175 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 TPTEP56180 551 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 TAS2R41P59536 307 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 KRR1Q13601 381 aaKnown RBP5.02□□□□□ -1.61
CD44-237ENST00000534082 RFX4Q33E94 735 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 SLC18B1Q6NT16 456 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 PGM2L1Q6PCE3 622 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 MAVSQ7Z434 540 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 TSEN54Q7Z6J9 526 aaKnown RBP5.02□□□□□ -1.61
CD44-237ENST00000534082 LYPD6Q86Y78 171 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 LINC00346Q8IVM7 164 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 SGPP2Q8IWX5 399 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 CYB561A3Q8NBI2 242 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 OR51A7Q8NH64 312 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 GTF2H4Q92759 462 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 RPL3LQ92901 407 aaKnown RBP5.02□□□□□ -1.61
CD44-237ENST00000534082 STMN2Q93045 179 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 SDSLQ96GA7 329 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 Q96M85 177 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 TMEM38AQ9H6F2 299 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 OPA3Q9H6K4 179 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 WDR55Q9H6Y2 383 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms