RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZNF283Q8N7M2 679 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 SLC38A9Q8NBW4 561 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 DDIT4LQ96D03 193 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 CA14Q9ULX7 337 aa17.07■□□□□ 0.32
CAPN1-226ENST00000533820 CELSR3Q9NYQ7 3312 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 LIPT2A6NK58 231 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 TMEM14DPA8MWL7 114 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 LMO7DNF2Z398 122 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 PCK2Q16822 640 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 OR5AS1Q8N127 324 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 CCDC54Q8NEL0 328 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 B3GAT1Q9P2W7 334 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF107Q9UII5 783 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-226ENST00000533820 TRBV11-1A0A0K0K1C0 115 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 CDC14BO60729 498 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 MBP02144 154 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 RAB32Q13637 225 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 TMEM128Q5BJH2 165 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 PYY3Q5JQD4 70 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 DRAM2Q6UX65 266 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 NAXEQ8NCW5 288 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 OR4A4PQ8NGN8 299 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 OR5H2Q8NGV7 314 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 SLC2A4RGQ9NR83 387 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 PPP4R1LQ9P1A2 415 aa17.06■□□□□ 0.32
CAPN1-226ENST00000533820 ANKUB1A6NFN9 424 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 E9PLN8 166 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 SLC34A2O95436 690 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 HIST1H1DP16402 221 aaKnown RBP17.05■□□□□ 0.32
CAPN1-226ENST00000533820 HLA-GP17693 338 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 RCC1P18754 421 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-226ENST00000533820 ITGA3P26006 1051 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 ID4P47928 161 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 DEGS2Q6QHC5 323 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 APCDD1LQ8NCL9 501 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 CPNE4Q96A23 557 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-226ENST00000533820 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 A0A1W2PR77 199 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 FBXO24O75426 580 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 SERPINA5P05154 406 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 CD27P26842 260 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 OR2B8PP59922 312 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 CSNK2A1P68400 391 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-226ENST00000533820 UEVLDQ8IX04 471 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 CSNK2A3Q8NEV1 391 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 OR51T1Q8NGJ9 327 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 MVB12AQ96EY5 273 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 LMAN1LQ9HAT1 526 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 C10orf142B7Z368 130 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 SERPINA2P20848 420 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 NME2P22392 152 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 HOXA6P31267 233 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 SLC6A9P48067 706 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF41P51814 821 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-226ENST00000533820 HNRNPKP61978 463 aaKnown RBP eCLIP17.05■□□□□ 0.328e-6■■■■□ 20.7
CAPN1-226ENST00000533820 DTWD2Q8NBA8 298 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 ARL11Q969Q4 196 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 ATG101Q9BSB4 218 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 SMIM3Q9BZL3 60 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 CYTL1Q9NRR1 136 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF701Q9NV72 531 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-226ENST00000533820 EHFQ9NZC4 300 aa17.05■□□□□ 0.32
CAPN1-226ENST00000533820 METTL1Q9UBP6 276 aaKnown RBP17.05■□□□□ 0.32
CAPN1-226ENST00000533820 FREM2Q5SZK8 3169 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 TEX13DA0A0J9YY54 714 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-226ENST00000533820 F5H5K5 113 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 APOBEC1P41238 236 aaKnown RBP17.04■□□□□ 0.32
CAPN1-226ENST00000533820 RBP2P50120 134 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 CLEC9AQ6UXN8 241 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 OR10G3Q8NGC4 313 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 CLCC1Q96S66 551 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 TOLLIPQ9H0E2 274 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 METTL7AQ9H8H3 244 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 CX3CR1P49238 355 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 SUPT4H1P63272 117 aaKnown RBP17.04■□□□□ 0.32
CAPN1-226ENST00000533820 PLXDC1Q8IUK5 500 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 SKA3Q8IX90 412 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 RNF141Q8WVD5 230 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 ST8SIA1Q92185 356 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 FLVCR1Q9Y5Y0 555 aa17.04■□□□□ 0.32
CAPN1-226ENST00000533820 IGLV3-19P01714 112 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 GLI4P10075 376 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 GABREP78334 506 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 PRAMEF20Q5VT98 475 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 PNLDC1Q8NA58 520 aaKnown RBP17.03■□□□□ 0.32
CAPN1-226ENST00000533820 OR13G1Q8NGZ3 307 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 CNTNAP3BQ96NU0 1288 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 TMPRSS5Q9H3S3 457 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 KLHL13Q9P2N7 655 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 GPR132Q9UNW8 380 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF878C9JN71 531 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 YIF1AO95070 293 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 TIAF1O95411 115 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF17P17021 662 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 SNU13P55769 128 aaKnown RBP17.03■□□□□ 0.32
CAPN1-226ENST00000533820 LCN10Q6JVE6 187 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 REC114Q7Z4M0 266 aa17.03■□□□□ 0.32
CAPN1-226ENST00000533820 C1orf147Q96MC9 270 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-226ENST00000533820 DUX1O43812 170 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms