RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MFGE8Q08431 387 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-215ENST00000533818 DUSP7Q16829 419 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 RFX4Q33E94 735 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 C6orf10Q5SRN2 563 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 AGBL2Q5U5Z8 902 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 THAP5Q7Z6K1 395 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 NKAIN4Q8IVV8 208 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 LRRC75AQ8NAA5 344 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 OR4D11Q8NGI4 311 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 TMEM255BQ8WV15 326 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 ZNF799Q96GE5 643 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 FMO2Q99518 471 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 MICU1Q9BPX6 476 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 GON7Q9BXV9 100 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 SP140LQ9H930 580 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 FAM53CQ9NYF3 392 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 GRHPRQ9UBQ7 328 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 CEPT1Q9Y6K0 416 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
CSDE1-215ENST00000533818 AP4M1O00189 453 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 SLC1A7O00341 560 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 ZSCAN12O43309 604 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 DNAJC8O75937 253 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-215ENST00000533818 ABHD2P08910 425 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 FAM106CPP0CH98 169 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 CD247P20963 164 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 ANOS1P23352 680 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 FASP25445 335 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 SCARB2Q14108 478 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 C5orf56Q8N8D9 126 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 GPR32P1Q8NGA4 272 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 OR51A7Q8NH64 312 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 TMEM239Q8WW34 195 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 DLX4Q92988 240 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-215ENST00000533818 OR4C12Q96R67 309 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 CLEC7AQ9BXN2 247 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 SYT4Q9H2B2 425 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 ACTR3BQ9P1U1 418 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 GLS2Q9UI32 602 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 MED31Q9Y3C7 131 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 ADAM18Q9Y3Q7 739 aa8.13□□□□□ -1.11
CSDE1-215ENST00000533818 PRSS29PA6NIE9 313 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 KRT4P19013 534 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 MESTQ5EB52 335 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 PGM2L1Q6PCE3 622 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 ZBTB49Q6ZSB9 765 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 HAPLN4Q86UW8 402 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 LINC00346Q8IVM7 164 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 MICU2Q8IYU8 434 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 ZNF561Q8N587 486 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 CD177Q8N6Q3 437 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 ZNF676Q8N7Q3 588 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 OR4P4Q8NGL7 312 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 ARPC1AQ92747 370 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 SPTSSAQ969W0 71 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 Q96M85 177 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 RTL8AQ9BWD3 113 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 OPA3Q9H6K4 179 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 KRCC1Q9NPI7 259 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-215ENST00000533818 AIG1Q9NVV5 245 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 DNAJB9Q9UBS3 223 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 N6AMT1Q9Y5N5 214 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 DNAH11Q96DT5 4516 aa8.12□□□□□ -1.11
CSDE1-215ENST00000533818 TRAV27A0A087WT01 109 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 RFPL4AA6NLU0 287 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 ANXA2P2A6NMY6 339 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 LEUTXA8MZ59 168 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 RFPL4AL1F8VTS6 287 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 I3L521 148 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 OR8U9P0C7N5 309 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 KIR3DL2P43630 455 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 SLC7A2P52569 658 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 ISL1P61371 349 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 GNB1P62873 340 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 SLC18B1Q6NT16 456 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 KCTD8Q6ZWB6 473 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 MAVSQ7Z434 540 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 PATL1Q86TB9 770 aaKnown RBP8.11□□□□□ -1.11
CSDE1-215ENST00000533818 ZNF575Q86XF7 245 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 CATSPERDQ86XM0 798 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 OR6V1Q8N148 313 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 C4orf33Q8N1A6 199 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 OR2AJ1Q8NGZ0 328 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 IFT81Q8WYA0 676 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 OR5B12Q96R08 314 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 PAPOLGQ9BWT3 736 aaKnown RBP8.11□□□□□ -1.11
CSDE1-215ENST00000533818 NUAK2Q9H093 628 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 TMEM133Q9H2Q1 129 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 GNB4Q9HAV0 340 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 SIGLEC8Q9NYZ4 499 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 PYCARDQ9ULZ3 195 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 RHBDD3Q9Y3P4 386 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 SESN1Q9Y6P5 492 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 FAT2Q9NYQ8 4349 aa8.11□□□□□ -1.11
CSDE1-215ENST00000533818 TMEM210A6NLX4 147 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 MTRF1O75570 445 aaKnown RBP8.1□□□□□ -1.11
CSDE1-215ENST00000533818 TK1P04183 234 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 PRDX2P32119 198 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 MNDAP41218 407 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 GPR12P47775 334 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms