RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ZFP36P26651 326 aaKnown RBP13.23□□□□□ -0.29
TSKU-204ENST00000533752 PSMB10P40306 273 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 GPM6AP51674 278 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 SEC61A1P61619 476 aaKnown RBP13.23□□□□□ -0.29
TSKU-204ENST00000533752 MRPL28Q13084 256 aaKnown RBP13.23□□□□□ -0.29
TSKU-204ENST00000533752 IL18R1Q13478 541 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 MICBQ29980 383 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 OGFRL1Q5TC84 451 aaPredicted RBP13.23□□□□□ -0.29
TSKU-204ENST00000533752 ZNF691Q5VV52 312 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
TSKU-204ENST00000533752 BTNL3Q6UXE8 466 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 DHRSXQ8N5I4 330 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 OR14K1Q8NGZ2 314 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 PPP1R14AQ96A00 147 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 TECTBQ96PL2 329 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 TMPRSS13Q9BYE2 586 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 C7orf69Q9H7B7 122 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 MRPS18AQ9NVS2 196 aaKnown RBP13.23□□□□□ -0.29
TSKU-204ENST00000533752 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 AASSQ9UDR5 926 aa13.23□□□□□ -0.29
TSKU-204ENST00000533752 SVEP1Q4LDE5 3571 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 CDIPTO14735 213 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 IGHA1P01876 353 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 RPSAP08865 295 aaKnown RBP13.22□□□□□ -0.29
TSKU-204ENST00000533752 GALEQ14376 348 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 WDR38Q5JTN6 314 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 CEP78Q5JTW2 689 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 TMEM42Q69YG0 159 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 FDX2Q6P4F2 183 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 MOB3CQ70IA8 216 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 C1QL2Q7Z5L3 287 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 SYS1Q8N2H4 156 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 SCCPDHQ8NBX0 429 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 C19orf18Q8NEA5 215 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 OR2G2Q8NGZ5 317 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 HAVCR2Q8TDQ0 301 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 APH1BQ8WW43 257 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 C10orf35Q96D05 121 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 MRI1Q9BV20 369 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 ALG8Q9BVK2 526 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 HSPE1-MOB4S4R3N1 261 aa13.22□□□□□ -0.29
TSKU-204ENST00000533752 LOC107986453A0A1B0GWG9 222 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 ZNF732B4DXR9 585 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 H0YAE9 185 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 PHF1O43189 567 aaPredicted RBP13.21□□□□□ -0.29
TSKU-204ENST00000533752 ADAM20O43506 726 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 GATBO75879 557 aaKnown RBP13.21□□□□□ -0.29
TSKU-204ENST00000533752 HTR1AP08908 422 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 EGR1P18146 543 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 OR12D2P58182 307 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 C11orf91Q3C1V1 193 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 TMEM244Q5VVB8 128 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 WDR25Q64LD2 544 aaPredicted RBP13.21□□□□□ -0.29
TSKU-204ENST00000533752 FAM90A1Q86YD7 464 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 ZNF573Q86YE8 665 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 PRSS35Q8N3Z0 413 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 ZNF671Q8TAW3 534 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 NANPQ8TBE9 248 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 RPL3LQ92901 407 aaKnown RBP13.21□□□□□ -0.29
TSKU-204ENST00000533752 C4orf36Q96KX1 117 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 FGF23Q9GZV9 251 aaPredicted RBP13.21□□□□□ -0.29
TSKU-204ENST00000533752 OR51I2Q9H344 312 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 METTL17Q9H7H0 456 aaPredicted RBP13.21□□□□□ -0.29
TSKU-204ENST00000533752 AMBNQ9NP70 447 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 KAAG1Q9UBP8 84 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 INSIG2Q9Y5U4 225 aa13.21□□□□□ -0.29
TSKU-204ENST00000533752 MXRA5Q9NR99 2828 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 LOC105371242A0A075B767 164 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 IGHV2-70DA0A0C4DH43 119 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 ANKRD61A6NGH8 418 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 J3QLW9 94 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 ENSAO43768 121 aaKnown RBP13.2□□□□□ -0.3
TSKU-204ENST00000533752 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
TSKU-204ENST00000533752 GYPAP02724 150 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 ZNF19P17023 458 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 KIR3DL2P43630 455 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 CCR9P51686 369 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 ELF3P78545 371 aaPredicted RBP13.2□□□□□ -0.3
TSKU-204ENST00000533752 ODF4Q2M2E3 257 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 CD276Q5ZPR3 534 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 LYPD2Q6UXB3 125 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 SLC36A1Q7Z2H8 476 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 OR52I1Q8NGK6 324 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 CHST5Q9GZS9 411 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 DNTTIP1Q9H147 329 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 MMP26Q9NRE1 261 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 ERVK13-1Q9NX77 482 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 SLC7A11Q9UPY5 501 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 MYRFQ9Y2G1 1151 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 POLDIP2Q9Y2S7 368 aa13.2□□□□□ -0.3
TSKU-204ENST00000533752 IGHV3OR15-7A0A075B7D8 119 aa13.19□□□□□ -0.3
TSKU-204ENST00000533752 ERICH4A6NGS2 130 aa13.19□□□□□ -0.3
TSKU-204ENST00000533752 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
TSKU-204ENST00000533752 TRAPPC2LH3BP13 241 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms