RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 OR52H1Q8NGJ2 320 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 ITLN2Q8WWU7 325 aaPredicted RBP15.95■□□□□ 0.14
SMPD1-208ENST00000533123 RNASE6Q93091 150 aaKnown RBP15.95■□□□□ 0.14
SMPD1-208ENST00000533123 GAL3ST1Q99999 423 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 MMP28Q9H239 520 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 V9GYS6 101 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 USP9XQ93008 2570 aaPredicted RBP15.95■□□□□ 0.14
SMPD1-208ENST00000533123 COL12A1Q99715 3063 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 IGKV1-9A0A0C4DH69 117 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 CTAG2O75638 210 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 MAP2K3P46734 347 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 SORCS2Q96PQ0 1159 aa15.95■□□□□ 0.14
SMPD1-208ENST00000533123 LYRM1O43325 122 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 CECR9P0C854 216 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 KIR2DL3P43628 341 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 TAS2R20P59543 309 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 TBC1D28Q2M2D7 210 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 KRT74Q7RTS7 529 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 SMIM4Q8WVI0 70 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 REEP6Q96HR9 211 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 METTL17Q9H7H0 456 aaPredicted RBP15.94■□□□□ 0.14
SMPD1-208ENST00000533123 PIGLQ9Y2B2 252 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 IGHV1-18A0A0C4DH31 117 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 IGLV1-44P01699 117 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 PGAP1Q75T13 922 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 NPRL2Q8WTW4 380 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 WFIKKN1Q96NZ8 548 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 USB1Q9BQ65 265 aaKnown RBP15.94■□□□□ 0.14
SMPD1-208ENST00000533123 OR51B6Q9H340 312 aa15.94■□□□□ 0.14
SMPD1-208ENST00000533123 ANKHD1Q8IWZ3 2542 aaKnown RBP15.93■□□□□ 0.14
SMPD1-208ENST00000533123 ACKR3P25106 362 aa15.93■□□□□ 0.14
SMPD1-208ENST00000533123 ZNF93P35789 620 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-208ENST00000533123 ZNF101Q8IZC7 436 aa15.93■□□□□ 0.14
SMPD1-208ENST00000533123 FOXRED1Q96CU9 486 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-208ENST00000533123 M0R1B8 84 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 LDLRAD4O15165 306 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 CTDSPLO15194 276 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 GSTZ1O43708 216 aaPredicted RBP15.92■□□□□ 0.14
SMPD1-208ENST00000533123 ALX3O95076 343 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 CLDN14O95500 239 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 NGFP01138 241 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 THBDP07204 575 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 HCKP08631 526 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 WNT5AP41221 380 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 TFF3Q07654 80 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 Q5BKY6 102 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 SEZ6L2Q6UXD5 910 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 WFDC8Q8IUA0 241 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 ZNF808Q8N4W9 903 aaPredicted RBP15.92■□□□□ 0.14
SMPD1-208ENST00000533123 FAM169BQ8N8A8 192 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 OR52I2Q8NH67 350 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 ENKURQ8TC29 256 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 LRRC46Q96FV0 321 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 FYTTD1Q96QD9 318 aaKnown RBP15.92■□□□□ 0.14
SMPD1-208ENST00000533123 C1QTNF5Q9BXJ0 243 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 ATG5Q9H1Y0 275 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 OR10A4Q9H209 315 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 RANGRFQ9HD47 186 aaPredicted RBP15.92■□□□□ 0.14
SMPD1-208ENST00000533123 UBR5O95071 2799 aaPredicted RBP15.92■□□□□ 0.14
SMPD1-208ENST00000533123 XRCC3O43542 346 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 AGAP20933 346 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 GPR176Q14439 515 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 UBE2V2Q15819 145 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 Q6ZSR3 168 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 NOXA1Q86UR1 476 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 UQCC2Q9BRT2 126 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 SLA2Q9H6Q3 261 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 CDH20Q9HBT6 801 aa15.92■□□□□ 0.14
SMPD1-208ENST00000533123 RBFOX1Q9NWB1 397 aaKnown RBP15.92■□□□□ 0.14
SMPD1-208ENST00000533123 SPTAN1Q13813 2472 aaKnown RBP15.92■□□□□ 0.14
SMPD1-208ENST00000533123 GGT3PA6NGU5 568 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 MTRF1O75570 445 aaKnown RBP15.91■□□□□ 0.14
SMPD1-208ENST00000533123 ERCC1P07992 297 aaPredicted RBP15.91■□□□□ 0.14
SMPD1-208ENST00000533123 THBS4P35443 961 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 GDNFP39905 211 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 TNK1Q13470 666 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 MZT2BQ6NZ67 158 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 COLCA1Q6ZS62 124 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 FAM46BQ96A09 425 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 A0A0B4J293 547 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 ORC5O43913 435 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 FAM157BP0CG42 384 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 OR3A4PP47883 348 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 ZNF92Q03936 586 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 ANGPTL5Q86XS5 388 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 TOMM5Q8N4H5 51 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 LINC01560Q8TB33 94 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 CHST5Q9GZS9 411 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 MRPL15Q9P015 296 aaKnown RBP15.91■□□□□ 0.14
SMPD1-208ENST00000533123 KLK11Q9UBX7 282 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 CACNG2Q9Y698 323 aa15.91■□□□□ 0.14
SMPD1-208ENST00000533123 HCFC1P51610 2035 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 ZNF35P13682 527 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 PPP3CBP16298 524 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 UNC119Q13432 240 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 AWAT2Q6E213 333 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 SEMA6DQ8NFY4 1073 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 NLKQ9UBE8 527 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 RABL2AQ9UBK7 228 aaPredicted RBP15.9■□□□□ 0.14
SMPD1-208ENST00000533123 RABL2BQ9UNT1 228 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms