RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CNIH3Q8TBE1 160 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 FAM81AQ8TBF8 368 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 SPRYD4Q8WW59 207 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-223ENST00000533079 MYDGFQ969H8 173 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 TEX12Q9BXU0 123 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 RBM38Q9H0Z9 239 aaKnown RBP10.18□□□□□ -0.78
CAPN1-223ENST00000533079 WDR76Q9H967 626 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 CNOT2Q9NZN8 540 aaKnown RBP10.18□□□□□ -0.78
CAPN1-223ENST00000533079 PSORS1C1Q9UIG5 152 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 FOXJ3Q9UPW0 622 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 ADAM18Q9Y3Q7 739 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 MAB21L2Q9Y586 359 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 SNX5Q9Y5X3 404 aa10.18□□□□□ -0.78
CAPN1-223ENST00000533079 MEIOCA2RUB1 952 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 EFCAB9A8MZ26 197 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 H3BN98 237 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 SLC16A7O60669 478 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 FBXO24O75426 580 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 GYPAP02724 150 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 HTR1AP08908 422 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 PIPP12273 146 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-223ENST00000533079 MUC1P15941 1255 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-223ENST00000533079 SDHAP31040 664 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 RPL4P36578 427 aaKnown RBP10.17□□□□□ -0.78
CAPN1-223ENST00000533079 UBE2E1P51965 193 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 ECH1Q13011 328 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 KRR1Q13601 381 aaKnown RBP10.17□□□□□ -0.78
CAPN1-223ENST00000533079 GINS1Q14691 196 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 AANATQ16613 207 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 KRTAP27-1Q3LI81 207 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 RNLSQ5VYX0 342 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 DNM1P34Q6PK57 102 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 PTCHD4Q6ZW05 846 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 KCTD8Q6ZWB6 473 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 SLC36A1Q7Z2H8 476 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 MRPL21Q7Z2W9 205 aaKnown RBP10.17□□□□□ -0.78
CAPN1-223ENST00000533079 ADCK1Q86TW2 530 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 GCSAMQ8N6F7 178 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 C11orf44Q8N8P7 122 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 OCSTAMPQ9BR26 566 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 PRRG3Q9BZD7 231 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 NPFFR1Q9GZQ6 430 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 SYT4Q9H2B2 425 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 SIRT7Q9NRC8 400 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 CLN6Q9NWW5 311 aa10.17□□□□□ -0.78
CAPN1-223ENST00000533079 VSX1Q9NZR4 365 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-223ENST00000533079 COA3Q9Y2R0 106 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-223ENST00000533079 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-223ENST00000533079 EFCAB10A6NFE3 127 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 H3BUX3 64 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 RGS10O43665 173 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 PTP4A3O75365 173 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 FCN3O75636 299 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 ACSM4P0C7M7 580 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 CA6P23280 308 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 POU1F1P28069 291 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 FMO3P31513 532 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 SLC15A1P46059 708 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 MICBQ29980 383 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 GPR139Q6DWJ6 353 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 XAF1Q6GPH4 301 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 C11orf87Q6NUJ2 197 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 GPR141Q7Z602 305 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 SVOPQ8N4V2 548 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 BOLLQ8N9W6 283 aaKnown RBP10.16□□□□□ -0.78
CAPN1-223ENST00000533079 OR13C2Q8NGS9 318 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 C8orf46Q8TAG6 207 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 PPP1R35Q8TAP8 253 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 TEX47Q8TBZ9 253 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 GGHQ92820 318 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 C12orf43Q96C57 262 aaKnown RBP10.16□□□□□ -0.78
CAPN1-223ENST00000533079 FAM46AQ96IP4 442 aaKnown RBP10.16□□□□□ -0.78
CAPN1-223ENST00000533079 Q96M85 177 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
CAPN1-223ENST00000533079 PAK1IP1Q9NWT1 392 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-223ENST00000533079 C1orf123Q9NWV4 160 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 MRPL15Q9P015 296 aaKnown RBP10.16□□□□□ -0.78
CAPN1-223ENST00000533079 BAIAP2Q9UQB8 552 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 LHFPL6Q9Y693 200 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 CEPT1Q9Y6K0 416 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 CDH10Q9Y6N8 788 aa10.16□□□□□ -0.78
CAPN1-223ENST00000533079 UNC119BA6NIH7 251 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 SNTNA6NMZ2 147 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 PTGES3LE9PB15 166 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 M0R1W7 72 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 MPIG6BO95866 241 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 LHBP01229 141 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 CRABP1P29762 137 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-223ENST00000533079 NSUN5P1Q3KNT7 163 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 SYT6Q5T7P8 510 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-223ENST00000533079 TMEM236Q5W0B7 351 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 Q8N7P7 452 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 OR13F1Q8NGS4 319 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 FCGR1BQ92637 280 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 R3HDM4Q96D70 268 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 GPX7Q96SL4 187 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-223ENST00000533079 ATF6BQ99941 703 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 MMP28Q9H239 520 aa10.15□□□□□ -0.78
CAPN1-223ENST00000533079 OPA3Q9H6K4 179 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms