RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 NXT1Q9UKK6 140 aaKnown RBP1.82□□□□□ -2.12
CD44-234ENST00000531873 TFR2Q9UP52 801 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 ACOT9Q9Y305 439 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 PPIL1Q9Y3C6 166 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 YTHDF2Q9Y5A9 579 aaKnown RBP1.82□□□□□ -2.12
CD44-234ENST00000531873 COL27A1Q8IZC6 1860 aaPredicted RBP1.82□□□□□ -2.12
CD44-234ENST00000531873 EIF4G1Q04637 1599 aaKnown RBP1.81□□□□□ -2.12
CD44-234ENST00000531873 ADAMTSL3P82987 1691 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 IGLV3-16A0A075B6K0 115 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 IGHV6-1A0A0B4J1U7 121 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 TRAV8-4A0A0B4J246 113 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 IGKV6-21A0A0C4DH24 114 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 IGHV7-4-1A0A0J9YVY3 117 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 GOLGA8QA0A0J9YX86 632 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 FAM240AA0A1B0GVK7 77 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 A0A1B0GW15 77 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ZNF593O00488 134 aaPredicted RBP1.81□□□□□ -2.12
CD44-234ENST00000531873 RBFOX2O43251 390 aaKnown RBP eCLIP1.81□□□□□ -2.12
CD44-234ENST00000531873 CHST10O43529 356 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 GATCO43716 136 aaKnown RBP1.81□□□□□ -2.12
CD44-234ENST00000531873 CTDNEP1O95476 244 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 P01737 135 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 MT-ND4P03905 459 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ADRA2AP08913 450 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 OR56A5P0C7T3 313 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 AZU1P20160 251 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 APLNRP35414 380 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ARR3P36575 388 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 PRLHRP49683 370 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 DMTNQ08495 405 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 C2orf54Q08AI8 447 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 PTGES3Q15185 160 aaKnown RBP1.81□□□□□ -2.12
CD44-234ENST00000531873 ZNF691Q5VV52 312 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ZNF695Q8IW36 515 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 SAXO1Q8IYX7 474 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 SLC7A5P1Q8MH63 180 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 CDRT4Q8N9R6 151 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 OR1L1Q8NH94 360 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 UBALD1Q8TB05 177 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ENKURQ8TC29 256 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ZFAND1Q8TCF1 268 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 C17orf50Q8WW18 174 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ESR2Q92731 530 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ATP6V1G3Q96LB4 118 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ZNF75AQ96N20 296 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 NAPGQ99747 312 aaPredicted RBP1.81□□□□□ -2.12
CD44-234ENST00000531873 SFXN3Q9BWM7 321 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 VCXQ9H320 206 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 ACOT13Q9NPJ3 140 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 CYB5R1Q9UHQ9 305 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 KLK12Q9UKR0 248 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 RAB26Q9ULW5 256 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 WIF1Q9Y5W5 379 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 THADAQ6YHU6 1953 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 PTPRTO14522 1441 aa1.81□□□□□ -2.12
CD44-234ENST00000531873 SIGLEC1Q9BZZ2 1709 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 TRAV8-6A0A0B4J262 113 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 IGKV6D-41A0A0C4DH26 115 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 GOLGA8JA6NMD2 632 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 M0R1X1 148 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 CCNKO75909 580 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 CD8AP01732 235 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 HLA-DQA1P01909 254 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 RPN2P04844 631 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 MMP7P09237 267 aaPredicted RBP1.8□□□□□ -2.12
CD44-234ENST00000531873 LINC00869P0C866 280 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 GOLGA8HP0CJ92 632 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 ME2P23368 584 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 OPRK1P41145 380 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 CXCL12P48061 93 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 RGS6P49758 472 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 NAB1Q13506 487 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 EBI3Q14213 229 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 GUSBP1Q15486 140 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 SLC25A35Q3KQZ1 300 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 LRRC8AQ8IWT6 810 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 GAPTQ8N292 157 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 TMEM256Q8N2U0 113 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 ATPAF2Q8N5M1 289 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 LINC00337Q8N6G1 96 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 TTLQ8NG68 377 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 OR6K2Q8NGY2 324 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 OR13G1Q8NGZ3 307 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 LINC01560Q8TB33 94 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 NT5CQ8TCD5 201 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 DCAKDQ8WVC6 231 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 ING5Q8WYH8 240 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 CPNE4Q96A23 557 aaPredicted RBP1.8□□□□□ -2.12
CD44-234ENST00000531873 TMEM159Q96B96 161 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 CDX2Q99626 313 aaPredicted RBP1.8□□□□□ -2.12
CD44-234ENST00000531873 PDCD1LG2Q9BQ51 273 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 ZNF649Q9BS31 505 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 RSG1Q9BU20 258 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 BEX2Q9BXY8 128 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 SHCBP1LQ9BZQ2 653 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 COA1Q9GZY4 146 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 PORCNQ9H237 461 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 VCX3AQ9NNX9 186 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 SIRT7Q9NRC8 400 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 SDHAF2Q9NX18 166 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms