RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 FAM96BQ9Y3D0 163 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 LRP12Q9Y561 859 aa12.97□□□□□ -0.33
CPSF1-205ENST00000531042 NKX6-3A6NJ46 265 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 RNASEK-C17orf49H0YIS7 233 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 E2F6O75461 281 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 TFF1P04155 84 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 ANXA8P13928 327 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 RPS7P62081 194 aaKnown RBP12.96□□□□□ -0.33
CPSF1-205ENST00000531042 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 OCLNQ16625 522 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 TMEM236Q5W0B7 351 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 BRICD5Q6PL45 260 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 KRT74Q7RTS7 529 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 KRT77Q7Z794 578 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 LINC01006Q8NI28 216 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 H1FXQ92522 213 aaKnown RBP12.96□□□□□ -0.33
CPSF1-205ENST00000531042 MED30Q96HR3 178 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 HIST1H2AAQ96QV6 131 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 SEMA6AQ9H2E6 1030 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 SLC25A19Q9HC21 320 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 LAMP5Q9UJQ1 280 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 CAB39Q9Y376 341 aaPredicted RBP12.96□□□□□ -0.33
CPSF1-205ENST00000531042 RNF114Q9Y508 228 aa12.96□□□□□ -0.33
CPSF1-205ENST00000531042 A0A0U1RQV5 110 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 ACOD1A6NK06 481 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 SIGLEC5O15389 551 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 ACAA1P09110 424 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-205ENST00000531042 FBP1P09467 338 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 MAP2K3P46734 347 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 GPM6AP51674 278 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 DLX1P56177 255 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 PRB3Q04118 309 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-205ENST00000531042 APOFQ13790 326 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 TAF9Q16594 264 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 DGUOKQ16854 277 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 DEGS2Q6QHC5 323 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 TNFRSF14Q92956 283 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 TEX12Q9BXU0 123 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 YIPF3Q9GZM5 350 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 FAM206AQ9NX38 181 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 NLKQ9UBE8 527 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 DNAJB9Q9UBS3 223 aa12.95□□□□□ -0.34
CPSF1-205ENST00000531042 SLC25A10Q9UBX3 287 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-205ENST00000531042 TMEM269A0A1B0GVZ9 245 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 NPFFO15130 113 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 RHBDL1O75783 438 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 CLPXO76031 633 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 GLRA1P23415 457 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 EEF1B2P24534 225 aaKnown RBP12.94□□□□□ -0.34
CPSF1-205ENST00000531042 CAV3P56539 151 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 GNG3P63215 75 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 DEFA6Q01524 100 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 KLRD1Q13241 179 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 CEACAM21Q3KPI0 293 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 KCTD18Q6PI47 426 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-205ENST00000531042 GDPGP1Q6ZNW5 385 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 TRPM8Q7Z2W7 1104 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 SPATA24Q86W54 205 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 ZSCAN4Q8NAM6 433 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-205ENST00000531042 PAPD5Q8NDF8 572 aaKnown RBP12.94□□□□□ -0.34
CPSF1-205ENST00000531042 FAM81AQ8TBF8 368 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 LRTOMTQ8WZ04 291 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 ITFG2Q969R8 447 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 TEAD3Q99594 435 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 OR51I2Q9H344 312 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 YY1AP1Q9H869 796 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 TVP23BQ9NYZ1 205 aa12.94□□□□□ -0.34
CPSF1-205ENST00000531042 A0A1W2PRD5 423 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 A0A1W2PRF3 423 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 A0A1W2PRM7 423 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 TCRBV3S1A0A5B6 114 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 CCDC182A6NF36 153 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 ZNF732B4DXR9 585 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 M0R1W7 72 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 PSMD9O00233 223 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 FKBP6O75344 327 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 IGLV3-1P01715 115 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 ATP6V1B1P15313 513 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 NDUFB7P17568 137 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 PROK1P58294 105 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 FLOT2Q14254 428 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 CEP78Q5JTW2 689 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 Q6ZSV7 163 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 MROQ9BYG7 248 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 PBOV1Q9GZY1 135 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 ZNF222Q9UK12 451 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
CPSF1-205ENST00000531042 IGKV1D-17A0A075B6S4 117 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 MEIOCA2RUB1 952 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 PRR32B1ATL7 298 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 TIMM23O14925 209 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 ZNF254O75437 659 aa12.92□□□□□ -0.34
CPSF1-205ENST00000531042 MRPL3P09001 348 aaKnown RBP12.92□□□□□ -0.34
CPSF1-205ENST00000531042 PSG2P11465 335 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms