RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 ZNF35P13682 527 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 MMP15P51511 669 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 PPP1CBP62140 327 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 MRPS10P82664 201 aaKnown RBP18.23■□□□□ 0.51
VPS28-212ENST00000530836 PPA1Q15181 289 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 MYPOPQ86VE0 399 aaPredicted RBP18.23■□□□□ 0.51
VPS28-212ENST00000530836 OR56B2PQ8NGI1 322 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 RNASE6Q93091 150 aaKnown RBP18.23■□□□□ 0.51
VPS28-212ENST00000530836 BCL2L14Q9BZR8 327 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 ACTR6Q9GZN1 396 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 GPR173Q9NS66 373 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 UTP20O75691 2785 aaKnown RBP18.23■□□□□ 0.51
VPS28-212ENST00000530836 METTL21EPA6NDL7 271 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 PRSS44E7EML9 344 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 C16orf97H3BN30 126 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 XRCC3O43542 346 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 CECR9P0C854 216 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 SELEP16581 610 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 RBP2P50120 134 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 BAK1Q16611 211 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 TMEM69Q5SWH9 247 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 HACD4Q5VWC8 232 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 TRIQKQ629K1 86 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 SNX29P2Q8IUI4 249 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 PIGCQ92535 297 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 BORCS8Q96FH0 119 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 NPDC1Q9NQX5 325 aaPredicted RBP18.23■□□□□ 0.51
VPS28-212ENST00000530836 C14orf119Q9NWQ9 140 aa18.23■□□□□ 0.51
VPS28-212ENST00000530836 CD300LBA8K4G0 201 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 C19orf84I3L1E1 186 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 CTAG2O75638 210 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 HLA-DQB1P01920 261 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 CSF3P09919 207 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 RAC2P15153 192 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 GRNP28799 593 aaKnown RBP18.22■□□□□ 0.51
VPS28-212ENST00000530836 PTGFRP43088 359 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 MTCP1P56278 107 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 HLXQ14774 488 aaPredicted RBP18.22■□□□□ 0.51
VPS28-212ENST00000530836 RAB12Q6IQ22 244 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 KCNG3Q8TAE7 436 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 CHPT1Q8WUD6 406 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 ABHD1Q96SE0 405 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 S100A13Q99584 98 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 C1QTNF6Q9BXI9 259 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 DOPEY2Q9Y3R5 2298 aa18.22■□□□□ 0.51
VPS28-212ENST00000530836 IGHV1-18A0A0C4DH31 117 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 NAT2P11245 290 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 CDK2P24941 298 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 ATP1B3P54709 279 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 FAM27E3Q08E93 113 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 PLCXD3Q63HM9 321 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 GLIPR1L1Q6UWM5 242 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 MOB3CQ70IA8 216 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 C19orf18Q8NEA5 215 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 SPACA5Q96QH8 159 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 PAPOLGQ9BWT3 736 aaKnown RBP18.21■□□□□ 0.51
VPS28-212ENST00000530836 MRPS7Q9Y2R9 242 aaKnown RBP18.21■□□□□ 0.51
VPS28-212ENST00000530836 MPC1Q9Y5U8 109 aa18.21■□□□□ 0.51
VPS28-212ENST00000530836 ANKRD30BLA7E2S9 258 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 GSTZ1O43708 216 aaPredicted RBP18.2■□□□□ 0.5
VPS28-212ENST00000530836 OR3A4PP47883 348 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 QRFPP83859 136 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 TAB1Q15750 504 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 OR1J1Q8NGS3 322 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 NPRL2Q8WTW4 380 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 HIST1H2AAQ96QV6 131 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 CST11Q9H112 138 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 ATG5Q9H1Y0 275 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 POFUT1Q9H488 388 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 ICE1Q9Y2F5 2266 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 BAHCC1Q9P281 2608 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 IGHV2OR16-5A0A0B4J2B6 119 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 TMEM14DPA8MWL7 114 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 FAM157BP0CG42 384 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 VSIG8P0DPA2 414 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 PPP3CBP16298 524 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 INPP1P49441 399 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 CEACAM21Q3KPI0 293 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 CDH24Q86UP0 819 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 ZDHHC23Q8IYP9 409 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 TNFAIP8L1Q8WVP5 186 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 RFT1Q96AA3 541 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 NKX3-1Q99801 234 aaPredicted RBP18.2■□□□□ 0.5
VPS28-212ENST00000530836 NUDT16L1Q9BRJ7 211 aaKnown RBP18.2■□□□□ 0.5
VPS28-212ENST00000530836 MRPL15Q9P015 296 aaKnown RBP18.2■□□□□ 0.5
VPS28-212ENST00000530836 SPEF1Q9Y4P9 236 aa18.2■□□□□ 0.5
VPS28-212ENST00000530836 A0A1W2PQ09 198 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 ZNF850A8MQ14 1090 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 PTTG1O95997 202 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 IGFBP2P18065 325 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 EFNB2P52799 333 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 NAAAQ02083 359 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 PRDX4Q13162 271 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 MADCAM1Q13477 382 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 GPR176Q14439 515 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 SP5Q6BEB4 398 aaPredicted RBP18.19■□□□□ 0.5
VPS28-212ENST00000530836 POC5Q8NA72 575 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 ACBD4Q8NC06 268 aa18.19■□□□□ 0.5
VPS28-212ENST00000530836 THAP7Q9BT49 309 aaPredicted RBP18.19■□□□□ 0.5
VPS28-212ENST00000530836 OR51B6Q9H340 312 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms